RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TMPRSS13Q9BYE2 586 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 CEP41Q9BYV8 373 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 LHX5Q9H2C1 402 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 TNMDQ9H2S6 317 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 TMEM245Q9H330 911 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 PNPLA8Q9NP80 782 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 KBTBD4Q9NVX7 518 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 ELOVL2Q9NXB9 296 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 SMC3Q9UQE7 1217 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 PCDHGA1Q9Y5H4 931 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 PCDHA5Q9Y5H7 936 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 RAI2Q9Y5P3 530 aa7.62□□□□□ -1.19
ATXN3-219ENST00000553488 TLN1Q9Y490 2541 aaKnown RBP7.62□□□□□ -1.19
ATXN3-219ENST00000553488 TDRD6O60522 2096 aaKnown RBP7.61□□□□□ -1.19
ATXN3-219ENST00000553488 FLNCQ14315 2725 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 LOC100289279A0A1B0GTE1 492 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 A0A1B0GTQ1 180 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 CBX4O00257 560 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 SYNCRIPO60506 623 aaKnown RBP7.61□□□□□ -1.19
ATXN3-219ENST00000553488 SEMA4FO95754 770 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 C4BPAP04003 597 aaKnown RBP7.61□□□□□ -1.19
ATXN3-219ENST00000553488 IGHV4-34P06331 123 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 FAM200BP0CF97 657 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 ACADMP11310 421 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 CD27P26842 260 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 ADORA2BP29275 332 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 CORO1AP31146 461 aaKnown RBP7.61□□□□□ -1.19
ATXN3-219ENST00000553488 ACADVLP49748 655 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 KIF11P52732 1056 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 SNRPFP62306 86 aaKnown RBP7.61□□□□□ -1.19
ATXN3-219ENST00000553488 IL9RQ01113 521 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 INCA1Q0VD86 236 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 RTP5Q14D33 572 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 SHBQ15464 509 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 FAM26FQ5R3K3 315 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 C10orf120Q5SQS8 335 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 FAM173BQ6P4H8 233 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 SERPINA13PQ6UXR4 307 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 CCDC186Q7Z3E2 898 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 UNC93AQ86WB7 457 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 ZC3H3Q8IXZ2 948 aaKnown RBP7.61□□□□□ -1.19
ATXN3-219ENST00000553488 CPXM2Q8N436 756 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 PDILTQ8N807 584 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 PARD3BQ8TEW8 1205 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 UCMAQ8WVF2 138 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 JAKMIP2Q96AA8 810 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 FCRL3Q96P31 734 aaPredicted RBP7.61□□□□□ -1.19
ATXN3-219ENST00000553488 HNRNPABQ99729 332 aaKnown RBP7.61□□□□□ -1.19
ATXN3-219ENST00000553488 PANK2Q9BZ23 570 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 CIPCQ9C0C6 399 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 CLIC5Q9NZA1 410 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 FTSJ1Q9UET6 329 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 AGO1Q9UL18 857 aaKnown RBP7.61□□□□□ -1.19
ATXN3-219ENST00000553488 ZNF510Q9Y2H8 683 aa7.61□□□□□ -1.19
ATXN3-219ENST00000553488 NBPF19A0A087WUL8 3843 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 KIF26BQ2KJY2 2108 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 VPS37CA5D8V6 355 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-219ENST00000553488 ENC1O14682 589 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 RFPL3O75679 317 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 B3GALT4O96024 378 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 ASS1P00966 412 aaKnown RBP7.6□□□□□ -1.19
ATXN3-219ENST00000553488 WNT1P04628 370 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 HOXD9P28356 352 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-219ENST00000553488 HLA-FP30511 346 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 HNF1BP35680 557 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 CHKAP35790 457 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 RPS14P62263 151 aaKnown RBP7.6□□□□□ -1.19
ATXN3-219ENST00000553488 ASIC1P78348 528 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 PCDH1Q08174 1060 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 DNAJC3Q13217 504 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 BIRC3Q13489 604 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 INAVAQ3KP66 663 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 ZACNQ401N2 412 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 CCDC157Q569K6 752 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 HES3Q5TGS1 186 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 ANKRD34AQ69YU3 496 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 SPOPLQ6IQ16 392 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 FBXL19Q6PCT2 694 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 KIAA0907Q7Z7F0 614 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-219ENST00000553488 NELFCDQ8IXH7 590 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 Q8N3U1 123 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 ZNF366Q8N895 744 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.6□□□□□ -1.19
ATXN3-219ENST00000553488 EPS8L3Q8TE67 593 aaKnown RBP7.6□□□□□ -1.19
ATXN3-219ENST00000553488 SAP25Q8TEE9 199 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 USP28Q96RU2 1077 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 SLC2A11Q9BYW1 496 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 PRSS16Q9NQE7 514 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 RASAL2Q9UJF2 1139 aa7.6□□□□□ -1.19
ATXN3-219ENST00000553488 DOPEY2Q9Y3R5 2298 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 TEX51A0A1B0GUA7 166 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 VILLO15195 856 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 FSBPO95073 299 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 TIAF1O95411 115 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 HMBSP08397 361 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 EPHA8P29322 1005 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-219ENST00000553488 PREPP48147 710 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 AP3M2P53677 418 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 BCAT1P54687 386 aa7.59□□□□□ -1.19
ATXN3-219ENST00000553488 DLG4P78352 724 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms