RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 DGKKQ5KSL6 1271 aa15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 C6orf118Q5T5N4 469 aa15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 RNF219Q5W0B1 726 aaPredicted RBP15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 MBLAC2Q68D91 279 aa15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 AADACL2Q6P093 401 aa15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 Q6ZS52 159 aa15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 AHI1Q8N157 1196 aa15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 NETO2Q8NC67 525 aa15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 USP33Q8TEY7 942 aa15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 UBE2Q2Q8WVN8 375 aa15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 SORCS1Q8WY21 1168 aa15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 RNF25Q96BH1 459 aaPredicted RBP15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 CALN1Q9BXU9 219 aa15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 CD248Q9HCU0 757 aa15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 C2orf42Q9NWW7 574 aa15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 MRPS17Q9Y2R5 130 aaKnown RBP15.22■□□□□ 0.03
MTHFD1-204ENST00000553405 ATG2BQ96BY7 2078 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 ZNF318Q5VUA4 2279 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 TBC1D3BA6NDS4 549 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 MFSD11O43934 449 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 ADAM23O75077 832 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 RNF40O75150 1001 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 ZRANB2O95218 330 aaKnown RBP eCLIP15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 HNRNPLP14866 589 aaKnown RBP eCLIP15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 GLDCP23378 1020 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 RPS9P46781 194 aaKnown RBP15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 VASPP50552 380 aaPredicted RBP15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 CLCN5P51795 746 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 NDST2P52849 883 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 OXCT1P55809 520 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 RWDD2BP57060 319 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 YBEYP58557 167 aaPredicted RBP15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 ARF5P84085 180 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 SLC10A2Q12908 348 aaPredicted RBP15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 UBXN2BQ14CS0 331 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 PPP2R5EQ16537 467 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 FBXO43Q4G163 708 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 EGFLAMQ63HQ2 1017 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 MAP7D3Q8IWC1 876 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 RCOR2Q8IZ40 523 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 SYNPOQ8N3V7 929 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 DCAF4L2Q8NA75 395 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 KCNV2Q8TDN2 545 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 HMCESQ96FZ2 354 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 ACOX2Q99424 681 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 SLC39A8Q9C0K1 460 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 MAGEH1Q9H213 219 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 CHRDQ9H2X0 955 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 LMAN1LQ9HAT1 526 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 THAP10Q9P2Z0 257 aaPredicted RBP15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 VPS51Q9UID3 782 aa15.21■□□□□ 0.03
MTHFD1-204ENST00000553405 KMT2EQ8IZD2 1858 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 GOLGA6L9A6NEM1 432 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 CHURC1-FNTBB4DL54 471 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 RASA4BC9J798 803 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 RASA4O43374 803 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 TIMM44O43615 452 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 SNAP91O60641 907 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 RAMP2O60895 175 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 DLDP09622 509 aaKnown RBP15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 KRT10P13645 584 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 NUMBP49757 651 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 COPS2P61201 443 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 GBE1Q04446 702 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 SERINC3Q13530 473 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 PARP15Q460N3 678 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 PREPLQ4J6C6 727 aaPredicted RBP15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 SLC35F6Q8N357 371 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 TMEM105Q8N8V8 129 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 IL17RCQ8NAC3 791 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 CELF6Q96J87 481 aaKnown RBP15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 ALS2CR12Q96Q35 445 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 PDFQ9HBH1 243 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 ZDHHC4Q9NPG8 344 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 ZKSCAN5Q9Y2L8 839 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 SIT1Q9Y3P8 196 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 CKAP5Q14008 2032 aa15.2■□□□□ 0.02
MTHFD1-204ENST00000553405 CXorf51AA0A1B0GTR3 108 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 PEX11BO96011 259 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 MT-CO1P00395 513 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 DCNP07585 359 aaKnown RBP15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 MRPS21P82921 87 aaKnown RBP15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 KLF1Q13351 362 aaPredicted RBP15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 POLD3Q15054 466 aaPredicted RBP15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 TFDP3Q5H9I0 405 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 ZNF569Q5MCW4 686 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 TMCO3Q6UWJ1 677 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 MAMSTRQ6ZN01 415 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 ARHGAP36Q6ZRI8 547 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 BBS12Q6ZW61 710 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 LZTR1Q8N653 840 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 UBL4BQ8N7F7 174 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 FLCNQ8NFG4 579 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 CYB5D2Q8WUJ1 264 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 EXOC4Q96A65 974 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 VOPP1Q96AW1 172 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 RBM41Q96IZ5 413 aaKnown RBP15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 OLFM3Q96PB7 478 aa15.19■□□□□ 0.02
MTHFD1-204ENST00000553405 WDR24Q96S15 920 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms