RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 CCNT1O60563 726 aaKnown RBP5.46□□□□□ -1.54
SCFD1-209ENST00000553280 CCNDBP1O95273 360 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 ALDOCP09972 364 aaKnown RBP5.46□□□□□ -1.54
SCFD1-209ENST00000553280 ATF7P17544 494 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-209ENST00000553280 MAKP20794 623 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 ABCD1P33897 745 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 MTNR1AP48039 350 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 ZNF84P51523 738 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 RARSP54136 660 aaKnown RBP5.46□□□□□ -1.54
SCFD1-209ENST00000553280 ADPRHP54922 357 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 SHC2P98077 582 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 B4GALNT1Q00973 533 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 PCID2Q5JVF3 399 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 LY6G5CQ5SRR4 150 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 NAPEPLDQ6IQ20 393 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 PDXDC1Q6P996 788 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 GJB7Q6PEY0 223 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 ENOSF1Q7L5Y1 443 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 BCDIN3DQ7Z5W3 292 aaKnown RBP5.46□□□□□ -1.54
SCFD1-209ENST00000553280 TMEM200AQ86VY9 491 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 RAB40AQ8WXH6 277 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 CNOT9Q92600 299 aaKnown RBP5.46□□□□□ -1.54
SCFD1-209ENST00000553280 ATP2A3Q93084 1043 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 KIF1BPQ96EK5 621 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 SAAL1Q96ER3 474 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 GPR78Q96P69 363 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 LBHD1Q9BQE6 289 aaPredicted RBP5.46□□□□□ -1.54
SCFD1-209ENST00000553280 IKZF4Q9H2S9 585 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 EPHX3Q9H6B9 360 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 SYNCQ9H7C4 482 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 PCDHB16Q9NRJ7 776 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 PLSCR4Q9NRQ2 329 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 TFCP2L1Q9NZI6 479 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 MPP6Q9NZW5 540 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 HDAC6Q9UBN7 1215 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 LYVE1Q9Y5Y7 322 aa5.46□□□□□ -1.54
SCFD1-209ENST00000553280 CLIC1O00299 241 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 AP3D1O14617 1153 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 SYN3O14994 580 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 PER2O15055 1255 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 MT-CO3P00414 261 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 CHRM4P08173 479 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 RFPL3SP0C7P2 107 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 BSGP35613 385 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 GJC1P36383 396 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 OAZ1P54368 228 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 SEMA3AQ14563 771 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 MFSD13AQ14CX5 517 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 GXYLT1Q4G148 440 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 SLC9B1Q4ZJI4 515 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 GLE1Q53GS7 698 aaKnown RBP5.45□□□□□ -1.54
SCFD1-209ENST00000553280 CFAP58Q5T655 872 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 LAIR1Q6GTX8 287 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 ZNF627Q7L945 461 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 PEG10Q86TG7 708 aaKnown RBP5.45□□□□□ -1.54
SCFD1-209ENST00000553280 CCDC105Q8IYK2 499 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 VPS52Q8N1B4 723 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 LCORLQ8N3X6 602 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 MAFAQ8NHW3 353 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-209ENST00000553280 C2CD4CQ8TF44 421 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 MLST8Q9BVC4 326 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 CIPCQ9C0C6 399 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 SLC25A13Q9UJS0 675 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 PKP3Q9Y446 797 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 SIRT4Q9Y6E7 314 aaPredicted RBP5.45□□□□□ -1.54
SCFD1-209ENST00000553280 SPATA31A5Q5VU36 1347 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 SPATA31A6Q5VVP1 1343 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 SPATA31A7Q8IWB4 1347 aa5.45□□□□□ -1.54
SCFD1-209ENST00000553280 LINC00473A8K010 186 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 C17orf100A8MU93 164 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 OVOL3O00110 214 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 CNTN5O94779 1100 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 SPARCP09486 303 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 ELFN1P0C7U0 828 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 EBLN1P0CF75 366 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 HKR1P10072 659 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 PORP16435 677 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-209ENST00000553280 RRM1P23921 792 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 MPLP40238 635 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 CCT8P50990 548 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 EIF3BP55884 814 aaKnown RBP5.44□□□□□ -1.54
SCFD1-209ENST00000553280 RPL7AP62424 266 aaKnown RBP5.44□□□□□ -1.54
SCFD1-209ENST00000553280 MRPS35P82673 323 aaKnown RBP5.44□□□□□ -1.54
SCFD1-209ENST00000553280 CREB5Q02930 508 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 TAP1Q03518 808 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 DMWDQ09019 674 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 ACVR2BQ13705 512 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 IL13RA2Q14627 380 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 SLC18A3Q16572 532 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 CCDC96Q2M329 555 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 AP5B1Q2VPB7 878 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 RILPL1Q5EBL4 403 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 SLC44A3Q8N4M1 653 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 TTC39CQ8N584 583 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 AMER2Q8N7J2 671 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 TERB1Q8NA31 727 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 LINC00476Q8WZB0 136 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 TBC1D5Q92609 795 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 COQ10AQ96MF6 247 aa5.44□□□□□ -1.54
SCFD1-209ENST00000553280 MMS19Q96T76 1030 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms