RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 SNAPC2Q13487 334 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 CEACAM7Q14002 265 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 PITRM1Q5JRX3 1037 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 GRTP1Q5TC63 336 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 OGFRL1Q5TC84 451 aaPredicted RBP11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 MARVELD2Q8N4S9 558 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 RP9Q8TA86 221 aaKnown RBP11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 P2RY11Q96G91 374 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 ATP6AP2A0A1C7CYW4 349 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 WNT10BO00744 389 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 MSCO60682 206 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 ATP6AP2O75787 350 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 ACAT1P24752 427 aaKnown RBP11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 PSME3P61289 254 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 RBP5P82980 135 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 MAP1SQ66K74 1059 aaPredicted RBP11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 ZNF554Q86TJ5 538 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 PBXIP1Q96AQ6 731 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 CSPG4P5Q96PW8 444 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 CPNE1Q99829 537 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 AS3MTQ9HBK9 375 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 PDLIM7Q9NR12 457 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 TRPC5Q9UL62 973 aaPredicted RBP11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 TMEM233B4DJY2 109 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 BOLA2-SMG1P6H3BVE0 249 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 CILPO75339 1184 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 TSPAN8P19075 237 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 UBA1P22314 1058 aaKnown RBP11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 ADRM1Q16186 407 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 CERCAMQ5T4B2 595 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 NAPRTQ6XQN6 538 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 AHI1Q8N157 1196 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 HDAC11Q96DB2 347 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 NAT9Q9BTE0 207 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 MED10Q9BTT4 135 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 DTLQ9NZJ0 730 aa11.81□□□□□ -0.52
PPFIA2-227ENST00000552948 FAM149AA5PLN7 773 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 SPATA31C2B4DYI2 1134 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 STBD1O95210 358 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 PTPN1P18031 435 aaKnown RBP11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 RPL10P27635 214 aaKnown RBP11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 CDH5P33151 784 aaPredicted RBP11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 ENTPD1P49961 510 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 FKBP1AP62942 108 aaKnown RBP11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 NEDD8Q15843 81 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 SH3D19Q5HYK7 790 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 KCNMB4Q86W47 210 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 GFM2Q969S9 779 aaKnown RBP11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 TBCBQ99426 244 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 ZNF670Q9BS34 389 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 LRRC4Q9HBW1 653 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 TIMMDC1Q9NPL8 285 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 DPP3Q9NY33 737 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 HES2Q9Y543 173 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 KLRG2A4D1S0 409 aaPredicted RBP11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 H3BNX3 289 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 RNASEH2AO75792 299 aaKnown RBP11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 SMIM18P0DKX4 95 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 TPSB2P20231 275 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 SLC5A2P31639 672 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 PRKAA1Q13131 559 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 CBX3Q13185 183 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 TPSAB1Q15661 275 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 PABPC1LQ4VXU2 614 aaKnown RBP11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 TRNP1Q6NT89 227 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 NUP93Q8N1F7 819 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 CCDC185Q8N715 623 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 NCSTNQ92542 709 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 PHF21BQ96EK2 531 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 SPATA33Q96N06 139 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 TMPRSS4Q9NRS4 437 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 WARS2Q9UGM6 360 aaKnown RBP11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 HEATR9A2RTY3 570 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 IL18RAPO95256 599 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 CCDC166P0CW27 439 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 HDCP19113 662 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 GNL1P36915 607 aaPredicted RBP11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 GRIA3P42263 894 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 TUBB3Q13509 450 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 ZNF460Q14592 562 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 TMEM132BQ14DG7 1078 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 EPGNQ6UW88 154 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 ANKRD23Q86SG2 305 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 GRIN3AQ8TCU5 1115 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 LZICQ8WZA0 190 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 LPGAT1Q92604 370 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 VPS39Q96JC1 886 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 ELMO2Q96JJ3 720 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 RAP2CQ9Y3L5 183 aa11.8□□□□□ -0.52
PPFIA2-227ENST00000552948 GPR25O00155 361 aa11.79□□□□□ -0.52
PPFIA2-227ENST00000552948 ACKR2O00590 384 aa11.79□□□□□ -0.52
PPFIA2-227ENST00000552948 MFSD11O43934 449 aa11.79□□□□□ -0.52
PPFIA2-227ENST00000552948 GCATO75600 419 aa11.79□□□□□ -0.52
PPFIA2-227ENST00000552948 MAP4P27816 1152 aaKnown RBP11.79□□□□□ -0.52
PPFIA2-227ENST00000552948 ARRB2P32121 409 aa11.79□□□□□ -0.52
PPFIA2-227ENST00000552948 NBPF12Q5TAG4 269 aaPredicted RBP11.79□□□□□ -0.52
PPFIA2-227ENST00000552948 GPR107Q5VW38 600 aa11.79□□□□□ -0.52
PPFIA2-227ENST00000552948 KLHL35Q6PF15 583 aa11.79□□□□□ -0.52
PPFIA2-227ENST00000552948 PDZD4Q76G19 769 aaPredicted RBP11.79□□□□□ -0.52
PPFIA2-227ENST00000552948 SAMD7Q7Z3H4 446 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms