RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 AGO1Q9UL18 857 aaKnown RBP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 YBX2Q9Y2T7 364 aaKnown RBP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 CPQQ9Y646 472 aa12.99□□□□□ -0.33
CACNB3-223ENST00000552480 NYNRINQ9P2P1 1898 aaKnown RBP12.99□□□□□ -0.33
CACNB3-223ENST00000552480 DOCK4Q8N1I0 1966 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 MTCL1Q9Y4B5 1905 aaKnown RBP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 TRAV19A0A0A6YYK7 116 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 ERI2A8K979 691 aaKnown RBP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 HMGB1P1B2RPK0 211 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 ZBTB24O43167 697 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 RAMP2O60895 175 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 BANF1O75531 89 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 TCEA3O75764 348 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 JCHAINP01591 159 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 IVLP07476 585 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 POU2F2P09086 479 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 MYL4P12829 197 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 MLNP12872 115 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 HDCP19113 662 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 NFKB1P19838 968 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 DDX6P26196 483 aaKnown RBP eCLIP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 CD68P34810 354 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 PHBP35232 272 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 MAGEA3P43357 314 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 SLC7A9P82251 487 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 CBX1P83916 185 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 SMAD3P84022 425 aaKnown RBP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 STAT4Q14765 748 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 ADGRF1Q5T601 910 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 TTC39BQ5VTQ0 682 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 RFWD3Q6PCD5 774 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 Q6ZNB5 142 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 ZNF534Q76KX8 674 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 CHST9Q7L1S5 443 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 CAND1Q86VP6 1230 aaKnown RBP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 ANKMY2Q8IV38 441 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 FBXO36Q8NEA4 188 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 ADAMTS19Q8TE59 1207 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 MAML1Q92585 1016 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 WBP2Q969T9 261 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 LRRC39Q96DD0 335 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 HMCESQ96FZ2 354 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 ATP6V1G3Q96LB4 118 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 PRICKLE1Q96MT3 831 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 CYP2S1Q96SQ9 504 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 GORASP1Q9BQQ3 440 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 CCDC77Q9BR77 488 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 WDR83Q9BRX9 315 aaKnown RBP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 ATXN3LQ9H3M9 355 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 LRRC4CQ9HCJ2 640 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 SMPD4Q9NXE4 827 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 VPS18Q9P253 973 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 DPP7Q9UHL4 492 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 IPO11Q9UI26 975 aaKnown RBP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 TEX264Q9Y6I9 313 aa12.98□□□□□ -0.33
CACNB3-223ENST00000552480 ZFP37Q9Y6Q3 630 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-223ENST00000552480 A0A1W2PRU2 124 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 GOLGA6CA6NDK9 693 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 F5H423 210 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-223ENST00000552480 RASGRF2O14827 1237 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 POLR3GO15318 223 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-223ENST00000552480 PSMD3O43242 534 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 CACNG3O60359 315 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 GREM1O60565 184 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 XYLBO75191 536 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 CLDN11O75508 207 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 SUN1O94901 812 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 AP2A1O95782 977 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 GOLGA6DP0CG33 693 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 EPCAMP16422 314 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 PTPN2P17706 415 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 OR1E1P30953 314 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 ELK3P41970 407 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 IFNAR2P48551 515 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 IL10RBQ08334 325 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 PRPSAP1Q14558 356 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 POLD3Q15054 466 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-223ENST00000552480 HP1BP3Q5SSJ5 553 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-223ENST00000552480 C6orf118Q5T5N4 469 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 LRRC8BQ6P9F7 803 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 ELMSAN1Q6PJG2 1045 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 FAM217AQ8IXS0 508 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 KLHDC8BQ8IXV7 354 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 PDCD7Q8N8D1 485 aaKnown RBP12.97□□□□□ -0.33
CACNB3-223ENST00000552480 MAB21L3Q8N8X9 362 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 LEMD2Q8NC56 503 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 USP33Q8TEY7 942 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 PGM2Q96G03 612 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 AGAP3Q96P47 875 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 PPP1R2P1Q96PQ5 205 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 LMAN2LQ9H0V9 348 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 VPS37BQ9H9H4 285 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 SP110Q9HB58 689 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 GOLGA6AQ9NYA3 693 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 LSM7Q9UK45 103 aaKnown RBP12.97□□□□□ -0.33
CACNB3-223ENST00000552480 CHMP2BQ9UQN3 213 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 ZNF510Q9Y2H8 683 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 DENND4CQ5VZ89 1909 aa12.97□□□□□ -0.33
CACNB3-223ENST00000552480 A0A1B0GVM2 712 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms