RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 TUBB6Q9BUF5 446 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 PCED1AQ9H1Q7 454 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 RWDD1Q9H446 243 aaPredicted RBP4.39□□□□□ -1.71
USP44-208ENST00000552440 MANSC1Q9H8J5 431 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 C17orf75Q9HAS0 396 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.39□□□□□ -1.71
USP44-208ENST00000552440 POLE3Q9NRF9 147 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 PCDHB16Q9NRJ7 776 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 SERINC1Q9NRX5 453 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 NMRK1Q9NWW6 199 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 CLIP2Q9UDT6 1046 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 SLCO3A1Q9UIG8 710 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 TSPYL4Q9UJ04 414 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 SARDHQ9UL12 918 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 WDR37Q9Y2I8 494 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 N6AMT1Q9Y5N5 214 aa4.39□□□□□ -1.71
USP44-208ENST00000552440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.39□□□□□ -1.71
USP44-208ENST00000552440 ZNF804BA4D1E1 1349 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 ARHGEF37A1IGU5 675 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 FAM90A20PA6NIJ5 464 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 SAC3D1A6NKF1 404 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 TMEM233B4DJY2 109 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 PPP6R2O75170 966 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 RASSF9O75901 435 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 IL18BPO95998 194 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 LTA4HP09960 611 aaKnown RBP4.38□□□□□ -1.71
USP44-208ENST00000552440 KRT4P19013 534 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 CD9P21926 228 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 MST1P26927 711 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 TNFRSF8P28908 595 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 ECHS1P30084 290 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 ICAM3P32942 547 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 NPY4RP50391 375 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 ACTR1AP61163 376 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 ARF5P84085 180 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 DEUP1Q05D60 604 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 RUNX1T1Q06455 604 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 CCDC15Q0P6D6 951 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 LMAN2Q12907 356 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 NPRL3Q12980 569 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 SP140Q13342 867 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 HABP2Q14520 560 aaPredicted RBP4.38□□□□□ -1.71
USP44-208ENST00000552440 INAQ16352 499 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 GALNTL6Q49A17 601 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 ZNF484Q5JVG2 852 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 LIPMQ5VYY2 423 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 MRNIPQ6NTE8 343 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 RINT1Q6NUQ1 792 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 KLHL35Q6PF15 583 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 ISLR2Q6UXK2 745 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 TMC5Q6UXY8 1006 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 FAM160B2Q86V87 743 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 CNTN4Q8IWV2 1026 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 BCL6BQ8N143 479 aaPredicted RBP4.38□□□□□ -1.71
USP44-208ENST00000552440 LRRC43Q8N309 656 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 MPP5Q8N3R9 675 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 OR6C4Q8NGE1 309 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 OR56B2PQ8NGI1 322 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 WDR48Q8TAF3 677 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 NOC3LQ8WTT2 800 aaKnown RBP4.38□□□□□ -1.71
USP44-208ENST00000552440 SNX33Q8WV41 574 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 ZCCHC14Q8WYQ9 949 aaKnown RBP4.38□□□□□ -1.71
USP44-208ENST00000552440 TNPO1Q92973 898 aaKnown RBP4.38□□□□□ -1.71
USP44-208ENST00000552440 TEKT1Q969V4 418 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 AJUBAQ96IF1 538 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 ZSWIM3Q96MP5 696 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 FAM111AQ96PZ2 611 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 PKP4Q99569 1192 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 TCF25Q9BQ70 676 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 NAA11Q9BSU3 229 aaPredicted RBP4.38□□□□□ -1.71
USP44-208ENST00000552440 HTATIP2Q9BUP3 242 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 UTP14AQ9BVJ6 771 aaKnown RBP4.38□□□□□ -1.71
USP44-208ENST00000552440 NELFAQ9H3P2 528 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 SLC35D1Q9NTN3 355 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 POLR3BQ9NW08 1133 aaPredicted RBP4.38□□□□□ -1.71
USP44-208ENST00000552440 PPP1R14DQ9NXH3 145 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 COX16Q9P0S2 106 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 SLC25A10Q9UBX3 287 aaPredicted RBP4.38□□□□□ -1.71
USP44-208ENST00000552440 ZNF70Q9UC06 446 aaPredicted RBP4.38□□□□□ -1.71
USP44-208ENST00000552440 FAM153AQ9UHL3 310 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 MAGEL2Q9UJ55 1249 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 BTBD3Q9Y2F9 522 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 PCDHGA5Q9Y5G8 931 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 PCDHGA1Q9Y5H4 931 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 NSD2O96028 1365 aa4.38□□□□□ -1.71
USP44-208ENST00000552440 VWA5AO00534 786 aa4.37□□□□□ -1.71
USP44-208ENST00000552440 TULP3O75386 442 aa4.37□□□□□ -1.71
USP44-208ENST00000552440 PAHP00439 452 aa4.37□□□□□ -1.71
USP44-208ENST00000552440 AMHP03971 560 aa4.37□□□□□ -1.71
USP44-208ENST00000552440 AMY1AP04745 511 aa4.37□□□□□ -1.71
USP44-208ENST00000552440 SELLP14151 372 aa4.37□□□□□ -1.71
USP44-208ENST00000552440 GDI1P31150 447 aa4.37□□□□□ -1.71
USP44-208ENST00000552440 NRIP1P48552 1158 aa4.37□□□□□ -1.71
USP44-208ENST00000552440 CAMLGP49069 296 aa4.37□□□□□ -1.71
USP44-208ENST00000552440 ATXN3P54252 364 aaPredicted RBP4.37□□□□□ -1.71
USP44-208ENST00000552440 RPL7AP62424 266 aaKnown RBP4.37□□□□□ -1.71
USP44-208ENST00000552440 SATB1Q01826 763 aa4.37□□□□□ -1.71
USP44-208ENST00000552440 KIF5AQ12840 1032 aa4.37□□□□□ -1.71
USP44-208ENST00000552440 PDCLQ13371 301 aa4.37□□□□□ -1.71
USP44-208ENST00000552440 MXD4Q14582 209 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms