RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ARHGEF26Q96DR7 871 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 MRGPRX3Q96LB0 322 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 SPON2Q9BUD6 331 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 MKRN2Q9H000 416 aaKnown RBP18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 SLC6A17Q9H1V8 727 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 DHX35Q9H5Z1 703 aaKnown RBP18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 CATSPERBQ9H7T0 1116 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 SPTLC3Q9NUV7 552 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 GPATCH2LQ9NWQ4 482 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 NENFQ9UMX5 172 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 ZFHX2Q9C0A1 2572 aaPredicted RBP18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 PTPRZ1P23471 2315 aaPredicted RBP18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 USP34Q70CQ2 3546 aa18.96■□□□□ 0.63
PRPF40B-216ENST00000552301 EDDM13A0A1B0GTR0 161 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 EIF3CLB5ME19 914 aaKnown RBP18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 RNASEH1O60930 286 aaKnown RBP18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 LRCH4O75427 683 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 PCK1P35558 622 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 PLK5Q496M5 336 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 ACCSLQ4AC99 568 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 ERMARDQ5T6L9 678 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 TC2NQ8N9U0 490 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 ALG14Q96F25 216 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 EIF3CQ99613 913 aaKnown RBP18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 SNRNP25Q9BV90 132 aaKnown RBP18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 ATP13A1Q9HD20 1204 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 PRSS16Q9NQE7 514 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 TMEM248Q9NWD8 314 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 DONSONQ9NYP3 566 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 UVRAGQ9P2Y5 699 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 USP18Q9UMW8 372 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 CYP8B1Q9UNU6 501 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 OR51B4Q9Y5P0 310 aa18.95■□□□□ 0.62
PRPF40B-216ENST00000552301 OTOGLQ3ZCN5 2332 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 TTC34A8MYJ7 566 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 FGF10O15520 208 aaPredicted RBP18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 RAMP2O60895 175 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 TMEM253P0C7T8 217 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 BCKDHBP21953 392 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 HTR7P34969 479 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 SSR1P43307 286 aaKnown RBP18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 GNA12Q03113 381 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 MAP7D1Q3KQU3 841 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 TTC31Q49AM3 519 aaPredicted RBP18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 ZNF776Q68DI1 518 aaPredicted RBP18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 IL31Q6EBC2 164 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 SLC36A4Q6YBV0 504 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 LPCAT2Q7L5N7 544 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 ZNF354CQ86Y25 554 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 OR7D4Q8NG98 312 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 MYO19Q96H55 970 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 PACSIN1Q9BY11 444 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 MAGEB5Q9BZ81 275 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 ZNF212Q9UDV6 495 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 DNAI1Q9UI46 699 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 LCMT1Q9UIC8 334 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 VPS51Q9UID3 782 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 SLCO3A1Q9UIG8 710 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 MYO15AQ9UKN7 3530 aa18.94■□□□□ 0.62
PRPF40B-216ENST00000552301 EP300Q09472 2414 aaPredicted RBP18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 A0A0D9SEW6 157 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 TARSL2A2RTX5 802 aaKnown RBP18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 GOLGA6L6A8MZA4 724 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 CBX4O00257 560 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 EEF2KO00418 725 aaKnown RBP18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 DAPK3O43293 454 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 SNAP91O60641 907 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 SIN3BO75182 1162 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 RETP07949 1114 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 COPAP53621 1224 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 PPP6R3Q5H9R7 873 aaPredicted RBP18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 PMS2CLQ68D20 193 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 RETSATQ6NUM9 610 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 NLRP14Q86W24 1093 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 PSTKQ8IV42 348 aaKnown RBP18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 ARFGAP1Q8N6T3 406 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 NIPA2Q8N8Q9 360 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 RTL3Q8N8U3 475 aaKnown RBP18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 LOXL4Q96JB6 756 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 ZC3H10Q96K80 434 aaKnown RBP18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 BTBD6Q96KE9 485 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 PEBP4Q96S96 227 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 PSMB7Q99436 277 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 MTG2Q9H4K7 406 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 HPCAL4Q9UM19 191 aa18.93■□□□□ 0.62
PRPF40B-216ENST00000552301 NDUFS2O75306 463 aa18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 DNTTP04053 509 aa18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 CYLC1P35663 651 aaPredicted RBP18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 DHPSP49366 369 aaPredicted RBP18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 VASPP50552 380 aaPredicted RBP18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 ZNF135P52742 658 aaPredicted RBP18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 RPL6Q02878 288 aaKnown RBP18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 SEMA3BQ13214 749 aa18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 BOLA3Q53S33 107 aa18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 METTL3Q86U44 580 aaKnown RBP18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 ATP11CQ8NB49 1132 aa18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 CCDC114Q96M63 670 aa18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 DUSP15Q9H1R2 295 aaPredicted RBP18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 MAGEH1Q9H213 219 aa18.92■□□□□ 0.62
PRPF40B-216ENST00000552301 ZWILCHQ9H900 591 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms