RNA–Protein interactions for RNA: ENST00000552197.5

SLC38A1-210, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC38A1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-210ENST00000552197 SERPINB12Q96P63 405 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 MED4Q9NPJ6 270 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 BCCIPQ9P287 314 aaKnown RBP eCLIP11.3□□□□□ -0.68e-9■■■□□ 15.8
SLC38A1-210ENST00000552197 DNMT3BQ9UBC3 853 aaKnown RBP11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 RSPH14Q9UHP6 348 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 IPO11Q9UI26 975 aaKnown RBP11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 HCFC2Q9Y5Z7 792 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 XIRP2A4UGR9 3374 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 J3KR12 359 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 MTSS1O43312 755 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 RAMP2O60895 175 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 RNF40O75150 1001 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 CDC25CP30307 473 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 CD68P34810 354 aaPredicted RBP11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 SLCO1A2P46721 670 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 GYS2P54840 703 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 NTHL1P78549 312 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 MTA1Q13330 715 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 SEMA5AQ13591 1074 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 SPARCL1Q14515 664 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 POLD3Q15054 466 aaPredicted RBP11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 PARP6Q2NL67 630 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 KRT71Q3SY84 523 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 AFMIDQ63HM1 303 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 LRIG3Q6UXM1 1119 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 LEKR1Q6ZMV7 388 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 GDPD5Q8WTR4 605 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 PYROXD1Q8WU10 500 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 SAMD11Q96NU1 681 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 SH3GL2Q99962 352 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 SLC46A2Q9BY10 475 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 UBP1Q9NZI7 540 aa11.3□□□□□ -0.6
SLC38A1-210ENST00000552197 TRAV19A0A0A6YYK7 116 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 ARHGAP42A6NI28 874 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 SMAPO00193 183 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 ALOX15BO15296 676 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 RHOP08100 348 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 NUDT17P0C025 328 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 MYZAPP0CAP1 466 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 PTPN2P17706 415 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 NFKB1P19838 968 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 ACVRL1P37023 503 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 FDFT1P37268 417 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 NDST2P52849 883 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 OLIG2Q13516 323 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 TTMPQ5BVD1 217 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 RABGAP1LQ5R372 815 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 GPR158Q5T848 1215 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 ACBD5Q5T8D3 534 aaPredicted RBP11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 CEP128Q6ZU80 1094 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 OTOP3Q7RTS5 596 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 CAND1Q86VP6 1230 aaKnown RBP11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 CNTD1Q8N815 330 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 FBXO36Q8NEA4 188 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 ZSCAN18Q8TBC5 510 aaPredicted RBP11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 PABPC5Q96DU9 382 aaKnown RBP11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 ZNF419Q96HQ0 510 aaPredicted RBP11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 TEKT5Q96M29 485 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 TSGA13Q96PP4 275 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 VPS37BQ9H9H4 285 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 DONSONQ9NYP3 566 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 VPS18Q9P253 973 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 ZNF212Q9UDV6 495 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 CHMP2BQ9UQN3 213 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 A0A0D9SEW6 157 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 CCDC195A0A1B0GUA6 201 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 GOLGA6L10A6NI86 522 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 RFXAPO00287 272 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 MATN3O15232 486 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 NEBLO76041 1014 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 OLFM2O95897 454 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 TEAD2Q15562 447 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 LONRF1Q17RB8 773 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 SLC5A9Q2M3M2 681 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 GRASPQ7Z6J2 395 aaPredicted RBP11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 RELL1Q8IUW5 271 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 IGDCC3Q8IVU1 814 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 OR52K2Q8NGK3 314 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 SHKBP1Q8TBC3 707 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 EPS8L3Q8TE67 593 aaKnown RBP11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 WDR83Q9BRX9 315 aaKnown RBP11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 TLE6Q9H808 572 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 SLC28A3Q9HAS3 691 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 SP110Q9HB58 689 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 CFAP97Q9P2B7 532 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 IGSF9Q9P2J2 1179 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 MSRAQ9UJ68 235 aa11.29□□□□□ -0.6
SLC38A1-210ENST00000552197 USP12O75317 370 aa11.28□□□□□ -0.6
SLC38A1-210ENST00000552197 SSTR1P30872 391 aa11.28□□□□□ -0.6
SLC38A1-210ENST00000552197 ELK3P41970 407 aa11.28□□□□□ -0.6
SLC38A1-210ENST00000552197 NRIP1P48552 1158 aa11.28□□□□□ -0.6
SLC38A1-210ENST00000552197 EIF3BP55884 814 aaKnown RBP11.28□□□□□ -0.6
SLC38A1-210ENST00000552197 PPP1R21Q6ZMI0 780 aa11.28□□□□□ -0.6
SLC38A1-210ENST00000552197 PALM2Q8IXS6 379 aa11.28□□□□□ -0.6
SLC38A1-210ENST00000552197 AGGF1Q8N302 714 aaeCLIP11.28□□□□□ -0.63e-8■□□□□ 9.6
SLC38A1-210ENST00000552197 C12orf76Q8N812 135 aaPredicted RBP11.28□□□□□ -0.6
SLC38A1-210ENST00000552197 AZIN2Q96A70 460 aa11.28□□□□□ -0.6
SLC38A1-210ENST00000552197 VAT1Q99536 393 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms