RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 ACVRL1P37023 503 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 NBL1P41271 181 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 MAPKAPK2P49137 400 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 TPI1P60174 286 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 GNA12Q03113 381 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 MESDQ14696 234 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 SPA17Q15506 151 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 PPP6R3Q5H9R7 873 aaPredicted RBP16.78■□□□□ 0.28
GCN1-209ENST00000551920 RFX8Q6ZV50 586 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 DCAF4L2Q8NA75 395 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 TEKT4Q8WW24 435 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 HSPH1Q92598 858 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 NCAPGQ9BPX3 1015 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 DESI2Q9BSY9 194 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 TPSD1Q9BZJ3 242 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 MKRN2Q9H000 416 aaKnown RBP16.78■□□□□ 0.28
GCN1-209ENST00000551920 CWC15Q9P013 229 aaKnown RBP16.78■□□□□ 0.28
GCN1-209ENST00000551920 SALL4Q9UJQ4 1053 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 PLA2G4CQ9UP65 541 aa16.78■□□□□ 0.28
GCN1-209ENST00000551920 CKAP5Q14008 2032 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 CCDC163A0A0D9SF12 145 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 A0A0U1RQJ8 604 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 WASH4PA8MWX3 477 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 AXIN1O15169 862 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 HRO43593 1189 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 ZMPSTE24O75844 475 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 MT-CO1P00395 513 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 VAV1P15498 845 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 GJC1P36383 396 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 COPAP53621 1224 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 NRLP54845 237 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 CAMK2GQ13555 558 aaPredicted RBP16.77■□□□□ 0.28
GCN1-209ENST00000551920 DPYSQ14117 519 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 ATP13A4Q4VNC1 1196 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 SDE2Q6IQ49 451 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 ZNF783Q6ZMS7 281 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 NPWQ8N729 165 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 ATRIPQ8WXE1 791 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 MRGPRX1Q96LB2 322 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 LACRTQ9GZZ8 138 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 KLC2Q9H0B6 622 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 GOLPH3Q9H4A6 298 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 PCDH18Q9HCL0 1135 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 POLMQ9NP87 494 aaPredicted RBP16.77■□□□□ 0.28
GCN1-209ENST00000551920 CD93Q9NPY3 652 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 KLHL11Q9NVR0 708 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 MFHAS1Q9Y4C4 1052 aa16.77■□□□□ 0.28
GCN1-209ENST00000551920 FANCMQ8IYD8 2048 aa16.77■□□□□ 0.27
GCN1-209ENST00000551920 WDR87Q6ZQQ6 2873 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 K7ERQ8 282 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 EEF2KO00418 725 aaKnown RBP16.76■□□□□ 0.27
GCN1-209ENST00000551920 FGF10O15520 208 aaPredicted RBP16.76■□□□□ 0.27
GCN1-209ENST00000551920 SRPRAP08240 638 aaKnown RBP16.76■□□□□ 0.27
GCN1-209ENST00000551920 CD48P09326 243 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 HTR7P34969 479 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 ARSEP51690 589 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 HADHBP55084 474 aaKnown RBP16.76■□□□□ 0.27
GCN1-209ENST00000551920 GSDMDP57764 484 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 ARF5P84085 180 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 STARD3Q14849 445 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 HNRNPA1L2Q32P51 320 aaKnown RBP16.76■□□□□ 0.27
GCN1-209ENST00000551920 BOLA3Q53S33 107 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 LINGO4Q6UY18 593 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 CACUL1Q86Y37 369 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 KDM1BQ8NB78 822 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 FRS2Q8WU20 508 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 TSC1Q92574 1164 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 ARHGEF2Q92974 986 aaKnown RBP16.76■□□□□ 0.27
GCN1-209ENST00000551920 ACE2Q9BYF1 805 aaPredicted RBP16.76■□□□□ 0.27
GCN1-209ENST00000551920 IRF2BPLQ9H1B7 796 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 RETREG1Q9H6L5 497 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 PRSS16Q9NQE7 514 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 HS3ST2Q9Y278 367 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 HYOU1Q9Y4L1 999 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 ACTL7AQ9Y615 435 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 DUSP10Q9Y6W6 482 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 USP34Q70CQ2 3546 aa16.76■□□□□ 0.27
GCN1-209ENST00000551920 EML5Q05BV3 1969 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 SYNCRIPO60506 623 aaKnown RBP16.75■□□□□ 0.27
GCN1-209ENST00000551920 BUB1BO60566 1050 aaPredicted RBP16.75■□□□□ 0.27
GCN1-209ENST00000551920 RAMP2O60895 175 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 SIN3BO75182 1162 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 ALDH1A2O94788 518 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 ARHGAP25P42331 645 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 SSR1P43307 286 aaKnown RBP16.75■□□□□ 0.27
GCN1-209ENST00000551920 SULT2A1Q06520 285 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 C9orf64Q5T6V5 341 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 ZC3H14Q6PJT7 736 aaKnown RBP16.75■□□□□ 0.27
GCN1-209ENST00000551920 POLNQ7Z5Q5 900 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 FRMD1Q8N878 549 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 NETO2Q8NC67 525 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 FAM71BQ8TC56 605 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 HMCESQ96FZ2 354 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 CSPG4P5Q96PW8 444 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 SPON2Q9BUD6 331 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 C2orf49Q9BVC5 232 aaPredicted RBP16.75■□□□□ 0.27
GCN1-209ENST00000551920 CATSPERBQ9H7T0 1116 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 ATP13A1Q9HD20 1204 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 ETNK2Q9NVF9 386 aa16.75■□□□□ 0.27
GCN1-209ENST00000551920 BCCIPQ9P287 314 aaKnown RBP eCLIP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms