RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 ZBED1O96006 694 aa14.91□□□□□ -0.02
VPS29-209ENST00000551655 SRPRAP08240 638 aaKnown RBP14.91□□□□□ -0.02
VPS29-209ENST00000551655 SLFN14P0C7P3 912 aa14.91□□□□□ -0.02
VPS29-209ENST00000551655 CLDN10P78369 228 aa14.91□□□□□ -0.02
VPS29-209ENST00000551655 ECT2LQ008S8 904 aa14.91□□□□□ -0.02
VPS29-209ENST00000551655 ELAVL3Q14576 367 aaKnown RBP14.91□□□□□ -0.02
VPS29-209ENST00000551655 ZACNQ401N2 412 aa14.91□□□□□ -0.02
VPS29-209ENST00000551655 KMT5BQ4FZB7 885 aa14.91□□□□□ -0.02
VPS29-209ENST00000551655 MPP7Q5T2T1 576 aa14.91□□□□□ -0.02
VPS29-209ENST00000551655 ZCCHC8Q6NZY4 707 aaKnown RBP14.91□□□□□ -0.02
VPS29-209ENST00000551655 KDM1BQ8NB78 822 aa14.91□□□□□ -0.02
VPS29-209ENST00000551655 DUSP23Q9BVJ7 150 aa14.91□□□□□ -0.02
VPS29-209ENST00000551655 KDM4CQ9H3R0 1056 aa14.91□□□□□ -0.02
VPS29-209ENST00000551655 EPB41L5Q9HCM4 733 aa14.91□□□□□ -0.02
VPS29-209ENST00000551655 KLF15Q9UIH9 416 aa14.91□□□□□ -0.02
VPS29-209ENST00000551655 PLAAQ9Y263 795 aa14.91□□□□□ -0.02
VPS29-209ENST00000551655 FBN2P35556 2912 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 A0A1W2PQU0 124 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 EME2A4GXA9 379 aaPredicted RBP14.9□□□□□ -0.02
VPS29-209ENST00000551655 NEMP2A6NFY4 417 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 PLD2O14939 933 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 LATS1O95835 1130 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 HLA-DRAP01903 254 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 UGT1A5P35504 534 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 NUDT1P36639 197 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 TXLNAP40222 546 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 PIK3CAP42336 1068 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 MLLT3P42568 568 aaPredicted RBP14.9□□□□□ -0.02
VPS29-209ENST00000551655 CDH18Q13634 790 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 FAM26FQ5R3K3 315 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 MANEAQ5SRI9 462 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 CCDC73Q6ZRK6 1079 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 ZFAND4Q86XD8 727 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 FBXO39Q8N4B4 442 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 HJURPQ8NCD3 748 aaPredicted RBP14.9□□□□□ -0.02
VPS29-209ENST00000551655 RNF139Q8WU17 664 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 OLA1Q9NTK5 396 aaKnown RBP14.9□□□□□ -0.02
VPS29-209ENST00000551655 EVA1BQ9NVM1 165 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 PLEKHB1Q9UF11 243 aaPredicted RBP14.9□□□□□ -0.02
VPS29-209ENST00000551655 CACNA1DQ01668 2161 aa14.9□□□□□ -0.02
VPS29-209ENST00000551655 LRRK1Q38SD2 2015 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 YJEFN3A6XGL0 299 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 E7ENQ6 273 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 SLC7A4O43246 635 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 ACSL4O60488 711 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 TCEA3O75764 348 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 LIPCP11150 499 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 AP3M2P53677 418 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 ZNF284Q2VY69 593 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 RNF219Q5W0B1 726 aaPredicted RBP14.89□□□□□ -0.03
VPS29-209ENST00000551655 BSPRYQ5W0U4 402 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 PM20D1Q6GTS8 502 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 Q6ZSR6 202 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 SV2AQ7L0J3 742 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 RAB11FIP2Q7L804 512 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 PTAR1Q7Z6K3 402 aaPredicted RBP14.89□□□□□ -0.03
VPS29-209ENST00000551655 TATDN2Q93075 761 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 PPP1R13BQ96KQ4 1090 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 HEXIM2Q96MH2 286 aaKnown RBP14.89□□□□□ -0.03
VPS29-209ENST00000551655 FOXP3Q9BZS1 431 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 NUCKS1Q9H1E3 243 aaKnown RBP14.89□□□□□ -0.03
VPS29-209ENST00000551655 PCDHGA7Q9Y5G6 932 aa14.89□□□□□ -0.03
VPS29-209ENST00000551655 IGLV3-27P01718 113 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 TRIM21P19474 475 aaKnown RBP14.88□□□□□ -0.03
VPS29-209ENST00000551655 CASP1P29466 404 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 CASRP41180 1078 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 ADIGQ0VDE8 80 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 SPIDRQ14159 915 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 FZD2Q14332 565 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 NCAPHQ15003 741 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 NR0B2Q15466 257 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 TPRG1LQ5T0D9 272 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 C1orf220Q5T0J3 134 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 SEL1L3Q68CR1 1132 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 SLC35F3Q8IY50 421 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 FRS2Q8WU20 508 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 SPAG5Q96R06 1193 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 CCDC3Q9BQI4 270 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 PISDQ9UG56 409 aa14.88□□□□□ -0.03
VPS29-209ENST00000551655 SRPRBQ9Y5M8 271 aaKnown RBP14.88□□□□□ -0.03
VPS29-209ENST00000551655 RNF103O00237 685 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 IRAK2O43187 625 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 LUC7L3O95232 432 aaKnown RBP14.87□□□□□ -0.03
VPS29-209ENST00000551655 RPN1P04843 607 aaKnown RBP14.87□□□□□ -0.03
VPS29-209ENST00000551655 ITIH1P19827 911 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 HNRNPA2B1P22626 353 aaKnown RBP14.87□□□□□ -0.03
VPS29-209ENST00000551655 AKT2P31751 481 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 SLC11A2P49281 568 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 HNRNPKP61978 463 aaKnown RBP eCLIP14.87□□□□□ -0.03
VPS29-209ENST00000551655 CEBPZQ03701 1054 aaKnown RBP14.87□□□□□ -0.03
VPS29-209ENST00000551655 PIP5KL1Q5T9C9 394 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 ABI3BPQ7Z7G0 1075 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 C12orf56Q8IXR9 622 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 RBFAQ8N0V3 343 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 LMX1AQ8TE12 382 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 JPH3Q8WXH2 748 aaPredicted RBP14.87□□□□□ -0.03
VPS29-209ENST00000551655 TAF4BQ92750 862 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 LIN37Q96GY3 246 aaPredicted RBP14.87□□□□□ -0.03
VPS29-209ENST00000551655 BMFQ96LC9 184 aa14.87□□□□□ -0.03
VPS29-209ENST00000551655 TCEAL2Q9H3H9 227 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms