RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 GARTP22102 1010 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 SLC6A4P31645 630 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 PRPHP41219 470 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 KIF11P52732 1056 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 CCL7P80098 99 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 COG7P83436 770 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 EIF3IQ13347 325 aaKnown RBP13.93□□□□□ -0.18
SNRPF-203ENST00000551316 MRPL49Q13405 166 aaKnown RBP13.93□□□□□ -0.18
SNRPF-203ENST00000551316 ARID5BQ14865 1188 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 FSCBQ5H9T9 825 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 SV2AQ7L0J3 742 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 ABI3BPQ7Z7G0 1075 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 GPD1LQ8N335 351 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 SDR16C5Q8N3Y7 309 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 TPCN2Q8NHX9 752 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 NKD1Q969G9 470 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 HVCN1Q96D96 273 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 RPL10LQ96L21 214 aaKnown RBP13.93□□□□□ -0.18
SNRPF-203ENST00000551316 TWNKQ96RR1 684 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.93□□□□□ -0.18
SNRPF-203ENST00000551316 EVA1BQ9NVM1 165 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 MARCH2Q9P0N8 246 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 ERRFI1Q9UJM3 462 aaPredicted RBP13.93□□□□□ -0.18
SNRPF-203ENST00000551316 VPS4AQ9UN37 437 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 ERVW-1Q9UQF0 538 aa13.93□□□□□ -0.18
SNRPF-203ENST00000551316 EDDM13A0A1B0GTR0 161 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 A0A1W2PQU0 124 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 SPINT1O43278 529 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 TBL1XO60907 577 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 LDLRP01130 860 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 PDGFAP04085 211 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 PRKAR1AP10644 381 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 OAS2P29728 719 aaKnown RBP13.92□□□□□ -0.18
SNRPF-203ENST00000551316 CCKBRP32239 447 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 C1orf61Q13536 156 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 TRIP4Q15650 581 aaPredicted RBP13.92□□□□□ -0.18
SNRPF-203ENST00000551316 DUOXA2Q1HG44 320 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 ZNF284Q2VY69 593 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 CCDC186Q7Z3E2 898 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 PTAR1Q7Z6K3 402 aaPredicted RBP13.92□□□□□ -0.18
SNRPF-203ENST00000551316 WDR49Q8IV35 697 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 LMX1AQ8TE12 382 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 ZNF516Q92618 1163 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 CCDC74AQ96AQ1 378 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 CDK5RAP3Q96JB5 506 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 BMFQ96LC9 184 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 UNKQ9C0B0 810 aaKnown RBP13.92□□□□□ -0.18
SNRPF-203ENST00000551316 SALL4Q9UJQ4 1053 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 TPX2Q9ULW0 747 aaKnown RBP13.92□□□□□ -0.18
SNRPF-203ENST00000551316 ZFR2Q9UPR6 939 aaKnown RBP13.92□□□□□ -0.18
SNRPF-203ENST00000551316 R3HCC1Q9Y3T6 440 aaKnown RBP13.92□□□□□ -0.18
SNRPF-203ENST00000551316 PCDHA5Q9Y5H7 936 aa13.92□□□□□ -0.18
SNRPF-203ENST00000551316 ZNF469Q96JG9 3925 aaPredicted RBP13.92□□□□□ -0.18
SNRPF-203ENST00000551316 A0A1W2PQ27 194 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 A0A1W2PQ64 194 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 A0A1W2PQC6 194 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 POM121BA6NF01 834 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.91□□□□□ -0.18
SNRPF-203ENST00000551316 RAD51BO15315 384 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 MSI1O43347 362 aaKnown RBP13.91□□□□□ -0.18
SNRPF-203ENST00000551316 CSF2P04141 144 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 RPLP0P05388 317 aaKnown RBP13.91□□□□□ -0.18
SNRPF-203ENST00000551316 FAM200BP0CF97 657 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 ST8SIA6P61647 398 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 HNRNPKP61978 463 aaKnown RBP eCLIP13.91□□□□□ -0.18
SNRPF-203ENST00000551316 EIF2S3LQ2VIR3 472 aaKnown RBP13.91□□□□□ -0.18
SNRPF-203ENST00000551316 PRR30Q53SZ7 412 aaPredicted RBP13.91□□□□□ -0.18
SNRPF-203ENST00000551316 DIEXFQ68CQ4 756 aaKnown RBP13.91□□□□□ -0.18
SNRPF-203ENST00000551316 SEL1L3Q68CR1 1132 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 Q6ZSR6 202 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 BHLHA9Q7RTU4 235 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 KYQ8NBH2 561 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 NDRG1Q92597 394 aaKnown RBP13.91□□□□□ -0.18
SNRPF-203ENST00000551316 RAD54LQ92698 747 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 CLIC5Q9NZA1 410 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 DKK3Q9UBP4 350 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 STOML2Q9UJZ1 356 aa13.91□□□□□ -0.18
SNRPF-203ENST00000551316 TARSL2A2RTX5 802 aaKnown RBP13.9□□□□□ -0.18
SNRPF-203ENST00000551316 LDHAP00338 332 aaKnown RBP13.9□□□□□ -0.18
SNRPF-203ENST00000551316 DLATP10515 647 aaKnown RBP13.9□□□□□ -0.18
SNRPF-203ENST00000551316 EIF2B5Q13144 721 aaKnown RBP13.9□□□□□ -0.18
SNRPF-203ENST00000551316 FGL2Q14314 439 aa13.9□□□□□ -0.18
SNRPF-203ENST00000551316 C16orf72Q14CZ0 275 aa13.9□□□□□ -0.18
SNRPF-203ENST00000551316 FAM133BQ5BKY9 247 aaKnown RBP13.9□□□□□ -0.18
SNRPF-203ENST00000551316 PITRM1Q5JRX3 1037 aa13.9□□□□□ -0.18
SNRPF-203ENST00000551316 PIP5KL1Q5T9C9 394 aa13.9□□□□□ -0.18
SNRPF-203ENST00000551316 HEATR4Q86WZ0 1026 aa13.9□□□□□ -0.18
SNRPF-203ENST00000551316 PLD4Q96BZ4 506 aa13.9□□□□□ -0.18
SNRPF-203ENST00000551316 TMA16Q96EY4 203 aaKnown RBP13.9□□□□□ -0.18
SNRPF-203ENST00000551316 C8orf76Q96K31 380 aa13.9□□□□□ -0.18
SNRPF-203ENST00000551316 ACCSQ96QU6 501 aa13.9□□□□□ -0.18
SNRPF-203ENST00000551316 GFM1Q96RP9 751 aaKnown RBP13.9□□□□□ -0.18
SNRPF-203ENST00000551316 CPEB1Q9BZB8 566 aaKnown RBP13.9□□□□□ -0.18
SNRPF-203ENST00000551316 STIM2Q9P246 746 aa13.9□□□□□ -0.18
SNRPF-203ENST00000551316 NOL7Q9UMY1 257 aaKnown RBP13.9□□□□□ -0.18
SNRPF-203ENST00000551316 PCDHB11Q9Y5F2 797 aa13.9□□□□□ -0.18
SNRPF-203ENST00000551316 USP3Q9Y6I4 520 aa13.9□□□□□ -0.18
SNRPF-203ENST00000551316 CD2BP2O95400 341 aaKnown RBP13.89□□□□□ -0.19
SNRPF-203ENST00000551316 DDAH2O95865 285 aa13.89□□□□□ -0.19
SNRPF-203ENST00000551316 FAM163BP0C2L3 166 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms