RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 VILLO15195 856 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 ZSCAN9O15535 394 aaPredicted RBP4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 SEPT4O43236 478 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 TULP3O75386 442 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 CCNDBP1O95273 360 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 RASAL1O95294 804 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 NPSP0C0P6 89 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 PSMB10P40306 273 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 CLK1P49759 484 aaKnown RBP4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 SNX16P57768 344 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 RPS3AP61247 264 aaKnown RBP4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 SSBP2P81877 361 aaPredicted RBP4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 PSG6Q00889 435 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 E2F1Q01094 437 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 SATB1Q01826 763 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 STK4Q13043 487 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 PDCLQ13371 301 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 TBRG1Q3YBR2 411 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 RNASE12Q5GAN4 147 aaKnown RBP4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 LRCH2Q5VUJ6 765 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 PAPD7Q5XG87 772 aaKnown RBP4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 NUGGCQ68CJ6 796 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 PLBD1Q6P4A8 553 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 ZNF804AQ7Z570 1209 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 C1QL2Q7Z5L3 287 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 NDUFAF2Q8N183 169 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 SRBD1Q8N5C6 995 aaKnown RBP4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 LSM14AQ8ND56 463 aaKnown RBP4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 MBD3L2Q8NHZ7 208 aaPredicted RBP4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 ZCCHC10Q8TBK6 192 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 DNAJB14Q8TBM8 379 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 RITA1Q96K30 269 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 WDR24Q96S15 920 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 MRPL9Q9BYD2 267 aaKnown RBP4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 EDEM3Q9BZQ6 932 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 TRIM5Q9C035 493 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 ZCWPW1Q9H0M4 648 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 SLC25A18Q9H1K4 315 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 OR10A4Q9H209 315 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 CCDC177Q9NQR7 707 aaPredicted RBP4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 PPP1R14DQ9NXH3 145 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 MORF4L1Q9UBU8 362 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 ZNF215Q9UL58 517 aaPredicted RBP4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 GDAQ9Y2T3 454 aa4.98□□□□□ -1.61
RAB3IP-214ENST00000550847 SOS1Q07889 1333 aaPredicted RBP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 GXYLT2A0PJZ3 443 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 NPIPB15A6NHN6 443 aaPredicted RBP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 SLC38A8A6NNN8 435 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 PTGES3LE9PB15 166 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 AP4M1O00189 453 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 PEX12O00623 359 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 UBE2CO00762 179 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 TNPO2O14787 897 aaKnown RBP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 CD3EAPO15446 510 aaKnown RBP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 SRGAP2O75044 1071 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 BEST1O76090 585 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 CER1O95813 267 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 BAG2O95816 211 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 CDK4P11802 303 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 SFPQP23246 707 aaKnown RBP eCLIP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 HADHAP40939 763 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 HARS2P49590 506 aaKnown RBP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 TBL3Q12788 808 aaKnown RBP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 FHL3Q13643 280 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 NFIL3Q16649 462 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 SUPT20HL1Q3ZLR7 823 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 CEP78Q5JTW2 689 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 CBWD5Q5RIA9 395 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 GPR139Q6DWJ6 353 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 MSANTD2Q6P1R3 559 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 CCDC105Q8IYK2 499 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 ANKRD44Q8N8A2 993 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 FAM71DQ8N9W8 422 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 FSIP1Q8NA03 581 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 LINS1Q8NG48 757 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 RSPH1Q8WYR4 309 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 NR1H4Q96RI1 486 aaPredicted RBP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 PAAF1Q9BRP4 392 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 MECRQ9BV79 373 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 QTRT1Q9BXR0 403 aaKnown RBP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 TAOK3Q9H2K8 898 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 RANBP17Q9H2T7 1088 aaKnown RBP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 PLEKHA2Q9HB19 425 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 ABCF3Q9NUQ8 709 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 HCFC1R1Q9NWW0 138 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 ASIC5Q9NY37 505 aa4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 SLC25A10Q9UBX3 287 aaPredicted RBP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 ZNF70Q9UC06 446 aaPredicted RBP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 CHORDC1Q9UHD1 332 aaPredicted RBP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 CCNL1Q9UK58 526 aaPredicted RBP4.97□□□□□ -1.61
RAB3IP-214ENST00000550847 SMTNL1A8MU46 457 aa4.96□□□□□ -1.62
RAB3IP-214ENST00000550847 AGPSO00116 658 aa4.96□□□□□ -1.62
RAB3IP-214ENST00000550847 RGS10O43665 173 aa4.96□□□□□ -1.62
RAB3IP-214ENST00000550847 CBFA2T3O75081 653 aa4.96□□□□□ -1.62
RAB3IP-214ENST00000550847 TUBB4AP04350 444 aa4.96□□□□□ -1.62
RAB3IP-214ENST00000550847 PRR35P0CG20 571 aa4.96□□□□□ -1.62
RAB3IP-214ENST00000550847 EPHB2P29323 1055 aa4.96□□□□□ -1.62
RAB3IP-214ENST00000550847 BSGP35613 385 aa4.96□□□□□ -1.62
RAB3IP-214ENST00000550847 ARL1P40616 181 aaPredicted RBP4.96□□□□□ -1.62
RAB3IP-214ENST00000550847 GPD2P43304 727 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms