RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 LHX1P48742 406 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 ZNF75DP51815 510 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 DSG1Q02413 1049 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 INCA1Q0VD86 236 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 CUL2Q13617 745 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 SOWAHAQ2M3V2 549 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 USP41Q3LFD5 358 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 KLHDC7AQ5VTJ3 777 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 DPY19L2P1Q6NXN4 242 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 FUT10Q6P4F1 479 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 DSTYKQ6XUX3 929 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 ARHGEF18Q6ZSZ5 1173 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 GPR155Q7Z3F1 870 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.09□□□□□ -1.43
SCAF11-213ENST00000550629 UNC93AQ86WB7 457 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 TMEM173Q86WV6 379 aaPredicted RBP6.09□□□□□ -1.43
SCAF11-213ENST00000550629 METTL23Q86XA0 190 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 VSTM4Q8IW00 320 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 PDCL2Q8N4E4 241 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 TTC9BQ8N6N2 239 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 NEK11Q8NG66 645 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 TIFAQ96CG3 184 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 SENP8Q96LD8 212 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 CRACR2AQ9BSW2 395 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 TTPALQ9BTX7 342 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 HERC2P3Q9BVR0 1158 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 NAA15Q9BXJ9 866 aaKnown RBP6.09□□□□□ -1.43
SCAF11-213ENST00000550629 TRIM5Q9C035 493 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 GRPEL1Q9HAV7 217 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 APOBEC3GQ9HC16 384 aaKnown RBP6.09□□□□□ -1.43
SCAF11-213ENST00000550629 SIX2Q9NPC8 291 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.09□□□□□ -1.43
SCAF11-213ENST00000550629 CEP72Q9P209 647 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 KIAA1257Q9ULG3 409 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 MAFFQ9ULX9 164 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 CNTN6Q9UQ52 1028 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.09□□□□□ -1.431e-9■□□□□ 8.1
SCAF11-213ENST00000550629 SNX9Q9Y5X1 595 aa6.09□□□□□ -1.43
SCAF11-213ENST00000550629 LAMA2P24043 3122 aaKnown RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 TDRD15B5MCY1 1934 aaKnown RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 ESYT3A0FGR9 886 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 F8W810 466 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 TEX33O43247 280 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 AP5Z1O43299 807 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 NOL4O94818 638 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 URODP06132 367 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 MMEP08473 750 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 TPM1P09493 284 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 CCDC172P0C7W6 258 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 ZNF20P17024 532 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 ACO1P21399 889 aaKnown RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 CSF2RBP32927 897 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 PBX3P40426 434 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 GLUD2P49448 558 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 BPIFB4P59827 614 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 YWHAHQ04917 246 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 SMARCB1Q12824 385 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 MAPRE1Q15691 268 aaKnown RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 FNDC3BQ53EP0 1204 aaKnown RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 TMEM177Q53S58 311 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 FAM171A1Q5VUB5 890 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 SLC8B1Q6J4K2 584 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 KIAA1841Q6NSI8 718 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 FAM71AQ8IYT1 594 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 ADGRF2Q8IZF7 708 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 CRYBG2Q8N1P7 616 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 THEM5Q8N1Q8 247 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 PPM1KQ8N3J5 372 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 UBR7Q8N806 425 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 MRPL43Q8N983 215 aaKnown RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 ZNF397Q8NF99 534 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 KBTBD7Q8WVZ9 684 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 SHC3Q92529 594 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 ANP32BQ92688 251 aaKnown RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 RABGGTAQ92696 567 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 SYN2Q92777 582 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 TNIP3Q96KP6 325 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 MMS19Q96T76 1030 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 ACBD6Q9BR61 282 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 C17orf80Q9BSJ5 609 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 PI4K2AQ9BTU6 479 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 LSM14BQ9BX40 385 aaKnown RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 VN1R3Q9BXE9 311 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 STK33Q9BYT3 514 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 TTYH3Q9C0H2 523 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 GANQ9H2C0 597 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 SNX25Q9H3E2 840 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 PIF1Q9H611 641 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 UBE2TQ9NPD8 197 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 MRPL17Q9NRX2 175 aaKnown RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 CISHQ9NSE2 258 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 FAM207AQ9NSI2 230 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 UCKL1Q9NWZ5 548 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 GALNT8Q9NY28 637 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 FNIP2Q9P278 1114 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 CACNG4Q9UBN1 327 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 DNAJC12Q9UKB3 198 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 BARX2Q9UMQ3 279 aaPredicted RBP6.08□□□□□ -1.44
SCAF11-213ENST00000550629 L1RE1Q9UN81 338 aa6.08□□□□□ -1.44
SCAF11-213ENST00000550629 STXBP5LQ9Y2K9 1186 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms