RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TLR4O00206 839 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 ENC1O14682 589 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 FGFR1OPO95684 399 aaKnown RBP22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 LDOC1O95751 146 aaPredicted RBP22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 ITGAVP06756 1048 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 TBC1D3HP0C7X1 549 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 METAP1P53582 386 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 BECN1Q14457 450 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 EFHC1Q5JVL4 640 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 TBC1D3GQ6DHY5 549 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 TBC1D3CQ6IPX1 549 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 TBC1D3Q8IZP1 549 aaPredicted RBP22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 ERVMER34-1Q9H9K5 563 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 IGSF10Q6WRI0 2623 aa22.34■■□□□ 1.17
SMARCC2-210ENST00000550519 CBX4O00257 560 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 SLC7A4O43246 635 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 ATP9BO43861 1147 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 HSF2BPO75031 334 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 SLC9A1P19634 815 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 EPHA8P29322 1005 aaPredicted RBP22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 RXRGP48443 463 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 ARRB1P49407 418 aaPredicted RBP22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 ACAP1Q15027 740 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 SLC45A4Q5BKX6 768 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 NAPEPLDQ6IQ20 393 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 MFSD2AQ8NA29 543 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 OR52K2Q8NGK3 314 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 OR8D1Q8WZ84 308 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 SHC3Q92529 594 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 CNDP2Q96KP4 475 aaKnown RBP22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 PPP1R13BQ96KQ4 1090 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 RPRD1AQ96P16 312 aaPredicted RBP22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 PPP1R9BQ96SB3 815 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 APEX2Q9UBZ4 518 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 SARDHQ9UL12 918 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 PCDHGC3Q9UN70 934 aa22.33■■□□□ 1.17
SMARCC2-210ENST00000550519 SYNJ2BP-COX16A0A087WUM0 186 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 PLK4O00444 970 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 PLRG1O43660 514 aaKnown RBP22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 RTN2O75298 545 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 C1SP09871 688 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 CDK4P11802 303 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 APBA1Q02410 837 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 CENPCQ03188 943 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 DNAJC3Q13217 504 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 MTA1Q13330 715 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 AUHQ13825 339 aaKnown RBP22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 ARHGAP44Q17R89 818 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 SOWAHCQ53LP3 525 aaPredicted RBP22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 DSG4Q86SJ6 1040 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 PRPF39Q86UA1 669 aaKnown RBP22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 EID2Q8N6I1 236 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 RNF34Q969K3 372 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 FEM1AQ9BSK4 669 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 COX16Q9P0S2 106 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 PPM1HQ9ULR3 514 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 OR51B4Q9Y5P0 310 aa22.32■■□□□ 1.16
SMARCC2-210ENST00000550519 A0A087WV48 116 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 GADD45BO75293 160 aaPredicted RBP22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 RFPL3O75679 317 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 GRAP2O75791 330 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 NUDT1P36639 197 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 USP8P40818 1118 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 ACADVLP49748 655 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 IRAK1P51617 712 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 BNIP3Q12983 259 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 SFMBT2Q5VUG0 894 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 FAM46CQ5VWP2 391 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 SMYD5Q6GMV2 418 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 OLFML1Q6UWY5 402 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 GBP6Q6ZN66 633 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 IQCHQ86VS3 1027 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 SPATS2Q86XZ4 545 aaKnown RBP22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 OXR1Q8N573 874 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 TSC1Q92574 1164 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 VANGL2Q9ULK5 521 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 DMTF1Q9Y222 760 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 HS3ST4Q9Y661 456 aa22.31■■□□□ 1.16
SMARCC2-210ENST00000550519 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 MCF2LO15068 1137 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 ALOX15BO15296 676 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 OVGP1Q12889 678 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 ZNF177Q13360 481 aaPredicted RBP22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 DLG2Q15700 870 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 C5orf22Q49AR2 442 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 ACCSLQ4AC99 568 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 AGBL4Q5VU57 503 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 C11orf57Q6ZUT1 292 aaPredicted RBP22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 FAM183BPQ6ZVS7 135 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 KANSL1Q7Z3B3 1105 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 TRIM69Q86WT6 500 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 PASD1Q8IV76 773 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 RWDD2AQ9UIY3 292 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 SLC25A13Q9UJS0 675 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 TBC1D30Q9Y2I9 924 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 LOC400499M0QZD8 3231 aa22.3■■□□□ 1.16
SMARCC2-210ENST00000550519 GTPBP10A4D1E9 387 aaKnown RBP22.29■■□□□ 1.16
SMARCC2-210ENST00000550519 CLDN11O75508 207 aa22.29■■□□□ 1.16
SMARCC2-210ENST00000550519 JUPP14923 745 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms