RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 CSGALNACT1Q8TDX6 532 aa10.54□□□□□ -0.72
RAB5C-207ENST00000550504 ARHGEF2Q92974 986 aaKnown RBP10.54□□□□□ -0.72
RAB5C-207ENST00000550504 CCDC114Q96M63 670 aa10.54□□□□□ -0.72
RAB5C-207ENST00000550504 OLFM3Q96PB7 478 aa10.54□□□□□ -0.72
RAB5C-207ENST00000550504 XPO6Q96QU8 1125 aaKnown RBP10.54□□□□□ -0.72
RAB5C-207ENST00000550504 LGMNQ99538 433 aa10.54□□□□□ -0.72
RAB5C-207ENST00000550504 DDX47Q9H0S4 455 aaKnown RBP10.54□□□□□ -0.72
RAB5C-207ENST00000550504 MAGEH1Q9H213 219 aa10.54□□□□□ -0.72
RAB5C-207ENST00000550504 RETREG1Q9H6L5 497 aa10.54□□□□□ -0.72
RAB5C-207ENST00000550504 L2HGDHQ9H9P8 463 aa10.54□□□□□ -0.72
RAB5C-207ENST00000550504 ABCB8Q9NUT2 735 aa10.54□□□□□ -0.72
RAB5C-207ENST00000550504 IGSF9Q9P2J2 1179 aa10.54□□□□□ -0.72
RAB5C-207ENST00000550504 DNPEPQ9ULA0 475 aa10.54□□□□□ -0.72
RAB5C-207ENST00000550504 TBC1D30Q9Y2I9 924 aa10.54□□□□□ -0.72
RAB5C-207ENST00000550504 CTAGE15A4D2H0 777 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 ARHGAP42A6NI28 874 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 CCDC188H7C350 402 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 ARNTLO00327 626 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 PPP1R12AO14974 1030 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 NARSO43776 548 aaKnown RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 CACNG3O60359 315 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 CTAGE8P0CG41 777 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 MX2P20592 715 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 GLDCP23378 1020 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 RBL1P28749 1068 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 HLA-FP30511 346 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 GJA4P35212 333 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 COILP38432 576 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 GARSP41250 739 aaKnown RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 SOX9P48436 509 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 DGKGP49619 791 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 OXCT1P55809 520 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 YBEYP58557 167 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 KDSRQ06136 332 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 AP1B1Q10567 949 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 BYSLQ13895 437 aaKnown RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 CYP1B1Q16678 543 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 PARP15Q460N3 678 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 FAM182AQ5T1J6 154 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 RNF43Q68DV7 783 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 NAIF1Q69YI7 327 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 ZNF572Q7Z3I7 529 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 CTAGE6Q86UF2 777 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 CDKL3Q8IVW4 592 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 CTAGE4Q8IX94 777 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 APCDD1Q8J025 514 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 C12orf50Q8NA57 414 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 LRRN4CLQ8ND94 238 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 SLC35B2Q8TB61 432 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 TFB1MQ8WVM0 346 aaKnown RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 NXPE3Q969Y0 559 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 QKIQ96PU8 341 aaKnown RBP eCLIP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 KRT12Q99456 494 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 TMEM121Q9BTD3 319 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 ATP13A1Q9HD20 1204 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 HOMER3Q9NSC5 361 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 SEPT10Q9P0V9 454 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 KIAA1522Q9P206 1035 aaPredicted RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 IPO11Q9UI26 975 aaKnown RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 GGA2Q9UJY4 613 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 VPS28Q9UK41 221 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 ZNF148Q9UQR1 794 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 RAD54BQ9Y620 910 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 NUP205Q92621 2012 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 COL4A3Q01955 1670 aa10.53□□□□□ -0.72
RAB5C-207ENST00000550504 NYNRINQ9P2P1 1898 aaKnown RBP10.53□□□□□ -0.72
RAB5C-207ENST00000550504 TICRRQ7Z2Z1 1910 aa10.52□□□□□ -0.72
RAB5C-207ENST00000550504 J3KR12 359 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 KCNK1O00180 336 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 CBX4O00257 560 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 RIOK3O14730 519 aaKnown RBP10.52□□□□□ -0.73
RAB5C-207ENST00000550504 NCAM2O15394 837 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 KCNN4O15554 427 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 SNAP91O60641 907 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 MAFKO60675 156 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 TULP3O75386 442 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 CISD3P0C7P0 127 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 PABPC1P11940 636 aaKnown RBP10.52□□□□□ -0.73
RAB5C-207ENST00000550504 VAV1P15498 845 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 CHRNA3P32297 505 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 ETFBP38117 255 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 MRPS25P82663 173 aaKnown RBP10.52□□□□□ -0.73
RAB5C-207ENST00000550504 ZP2Q05996 745 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 XRCC4Q13426 336 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 SERINC3Q13530 473 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 FUT11Q495W5 492 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 SLC45A4Q5BKX6 768 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 PITRM1Q5JRX3 1037 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 GRAMD4Q6IC98 578 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 CCDC137Q6PK04 289 aaKnown RBP10.52□□□□□ -0.73
RAB5C-207ENST00000550504 ZNF783Q6ZMS7 281 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 GSTA5Q7RTV2 222 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 ETFBKMTQ8IXQ9 262 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 CCDC105Q8IYK2 499 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 USP33Q8TEY7 942 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 NKD2Q969F2 451 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-207ENST00000550504 HDAC11Q96DB2 347 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 ALG14Q96F25 216 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 LMLNQ96KR4 655 aa10.52□□□□□ -0.73
RAB5C-207ENST00000550504 FEM1AQ9BSK4 669 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms