RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 FAM86C2PA6NEL3 165 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 MIF4GDA9UHW6 222 aaKnown RBP13.37□□□□□ -0.27
RAB5C-206ENST00000550406 RASA4BC9J798 803 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 DAPK3O43293 454 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 RASA4O43374 803 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 SNAP91O60641 907 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 ZMPSTE24O75844 475 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 ZRANB2O95218 330 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAB5C-206ENST00000550406 DCNP07585 359 aaKnown RBP13.37□□□□□ -0.27
RAB5C-206ENST00000550406 KRT10P13645 584 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 SEC13P55735 322 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 RWDD2BP57060 319 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 SLC10A2Q12908 348 aaPredicted RBP13.37□□□□□ -0.27
RAB5C-206ENST00000550406 DMC1Q14565 340 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 PAFAH1B3Q15102 231 aaKnown RBP13.37□□□□□ -0.27
RAB5C-206ENST00000550406 PTPRNQ16849 979 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 HS1BP3Q53T59 392 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 DGKKQ5KSL6 1271 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 C6orf118Q5T5N4 469 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 EGFLAMQ63HQ2 1017 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 NCBP2-AS2Q69YL0 99 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 ZNF783Q6ZMS7 281 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 Q6ZS52 159 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 BMP8AQ7Z5Y6 402 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 MAP7D3Q8IWC1 876 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 CCDC117Q8IWD4 279 aaPredicted RBP13.37□□□□□ -0.27
RAB5C-206ENST00000550406 AHI1Q8N157 1196 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 SLC35F6Q8N357 371 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 ZNF557Q8N988 423 aaPredicted RBP13.37□□□□□ -0.27
RAB5C-206ENST00000550406 FLCNQ8NFG4 579 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 TRIM58Q8NG06 486 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 USP33Q8TEY7 942 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 CYB5D2Q8WUJ1 264 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 MYO19Q96H55 970 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 MRGPRX3Q96LB0 322 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 ACOX2Q99424 681 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 MAGEH1Q9H213 219 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 POLR3BQ9NW08 1133 aaPredicted RBP13.37□□□□□ -0.27
RAB5C-206ENST00000550406 C2orf42Q9NWW7 574 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.37□□□□□ -0.27
RAB5C-206ENST00000550406 SIT1Q9Y3P8 196 aa13.37□□□□□ -0.27
RAB5C-206ENST00000550406 hCG_1818297A0A087WSY0 165 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 STK25O00506 426 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 TIMM44O43615 452 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 RNF40O75150 1001 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 CD160O95971 181 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 HNRNPLP14866 589 aaKnown RBP eCLIP13.36□□□□□ -0.27
RAB5C-206ENST00000550406 AOC1P19801 751 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 TIE1P35590 1138 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 YBEYP58557 167 aaPredicted RBP13.36□□□□□ -0.27
RAB5C-206ENST00000550406 ZNF211Q13398 564 aaPredicted RBP13.36□□□□□ -0.27
RAB5C-206ENST00000550406 POLD3Q15054 466 aaPredicted RBP13.36□□□□□ -0.27
RAB5C-206ENST00000550406 PREPLQ4J6C6 727 aaPredicted RBP13.36□□□□□ -0.27
RAB5C-206ENST00000550406 C2orf27AQ580R0 203 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 ZNF569Q5MCW4 686 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 SLC9A4Q6AI14 798 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 ARHGAP36Q6ZRI8 547 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 PLD5Q8N7P1 536 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 EXOC4Q96A65 974 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 PBXIP1Q96AQ6 731 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 HMCESQ96FZ2 354 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 ALS2CR12Q96Q35 445 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 MUC3BQ9H195 1237 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 MFSD1Q9H3U5 465 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 THAP10Q9P2Z0 257 aaPredicted RBP13.36□□□□□ -0.27
RAB5C-206ENST00000550406 VPS51Q9UID3 782 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 ERVW-1Q9UQF0 538 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 ACTL7AQ9Y615 435 aa13.36□□□□□ -0.27
RAB5C-206ENST00000550406 GOLGA6L9A6NEM1 432 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 WASH3PC4AMC7 463 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 FANCGO15287 622 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 KDELR3O43731 214 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 MFSD11O43934 449 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 RAMP2O60895 175 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 ADAM23O75077 832 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 MT-CO1P00395 513 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 POLR2EP19388 210 aaKnown RBP13.35□□□□□ -0.27
RAB5C-206ENST00000550406 RPS9P46781 194 aaKnown RBP13.35□□□□□ -0.27
RAB5C-206ENST00000550406 STK19P49842 368 aaPredicted RBP13.35□□□□□ -0.27
RAB5C-206ENST00000550406 PAPOLAP51003 745 aaKnown RBP13.35□□□□□ -0.27
RAB5C-206ENST00000550406 DNA2P51530 1060 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 CLCN5P51795 746 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 NDST2P52849 883 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 OXCT1P55809 520 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 COPS2P61201 443 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 MRPS21P82921 87 aaKnown RBP13.35□□□□□ -0.27
RAB5C-206ENST00000550406 ARF5P84085 180 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 GBE1Q04446 702 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 SERINC3Q13530 473 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 ENPP2Q13822 863 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 EIF4HQ15056 248 aaKnown RBP13.35□□□□□ -0.27
RAB5C-206ENST00000550406 RPS6KA1Q15418 735 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 PPP2R5EQ16537 467 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 FBXO43Q4G163 708 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 TMCO3Q6UWJ1 677 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 NPNTQ6UXI9 565 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 SYNPOQ8N3V7 929 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 CCDC33Q8N5R6 958 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 LZTR1Q8N653 840 aa13.35□□□□□ -0.27
RAB5C-206ENST00000550406 UBL4BQ8N7F7 174 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms