RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ZNF776Q68DI1 518 aaPredicted RBP16.2■□□□□ 0.18
DDX54-205ENST00000548786 LINGO4Q6UY18 593 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 TMC6Q7Z403 805 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 MMAAQ8IVH4 418 aaKnown RBP16.2■□□□□ 0.18
DDX54-205ENST00000548786 RGL4Q8IZJ4 473 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 STK40Q8N2I9 435 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 PSMB7Q99436 277 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 CNPY3Q9BT09 278 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 SPON2Q9BUD6 331 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 ZYG11BQ9C0D3 744 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 PARVAQ9NVD7 372 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 WSB2Q9NYS7 404 aaPredicted RBP16.2■□□□□ 0.18
DDX54-205ENST00000548786 CNOT8Q9UFF9 292 aaKnown RBP16.2■□□□□ 0.18
DDX54-205ENST00000548786 ADAMTS1Q9UHI8 967 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 CAPN11Q9UMQ6 739 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 TBC1D30Q9Y2I9 924 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 LUC7L2Q9Y383 392 aaKnown RBP16.2■□□□□ 0.18
DDX54-205ENST00000548786 OR51B4Q9Y5P0 310 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 GON4LQ3T8J9 2241 aa16.2■□□□□ 0.18
DDX54-205ENST00000548786 TNRC6BQ9UPQ9 1833 aaKnown RBP16.19■□□□□ 0.18
DDX54-205ENST00000548786 EDDM13A0A1B0GTR0 161 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 MEI4A8MW99 385 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 RTN2O75298 545 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 MT-CO1P00395 513 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 SERPING1P05155 500 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 CFIP05156 583 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 PLK1P53350 603 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 SULT2A1Q06520 285 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 POM121L1PQ3SYA9 428 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 C6orf118Q5T5N4 469 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 SLFN11Q7Z7L1 901 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 SNX19Q92543 992 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 RSPH9Q9H1X1 276 aaPredicted RBP16.19■□□□□ 0.18
DDX54-205ENST00000548786 GPATCH2LQ9NWQ4 482 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 DNAI1Q9UI46 699 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 VPS51Q9UID3 782 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 ITIH6Q6UXX5 1313 aa16.19■□□□□ 0.18
DDX54-205ENST00000548786 NYNRINQ9P2P1 1898 aaKnown RBP16.18■□□□□ 0.18
DDX54-205ENST00000548786 PRR5-ARHGAP8B1AHC4 643 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 K7ERQ8 282 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 CBX4O00257 560 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 KHNYNO15037 678 aaKnown RBP16.18■□□□□ 0.18
DDX54-205ENST00000548786 MID1O15344 667 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 CBFA2T2O43439 604 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 CREB3O43889 395 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 RNASEH1O60930 286 aaKnown RBP16.18■□□□□ 0.18
DDX54-205ENST00000548786 LRIG2O94898 1065 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 KCNA4P22459 653 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 ACSL1P33121 698 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 ARHGAP8P85298 464 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 TTC31Q49AM3 519 aaPredicted RBP16.18■□□□□ 0.18
DDX54-205ENST00000548786 TRIM61Q5EBN2 209 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 EFHC2Q5JST6 749 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 PLEKHA7Q6IQ23 1121 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 PPP1R2P3Q6NXS1 205 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 Q6ZVU0 165 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 SETD3Q86TU7 594 aaPredicted RBP16.18■□□□□ 0.18
DDX54-205ENST00000548786 METTL3Q86U44 580 aaKnown RBP16.18■□□□□ 0.18
DDX54-205ENST00000548786 SYT12Q8IV01 421 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 ATP11CQ8NB49 1132 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 PTPRN2Q92932 1015 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 TBC1D31Q96DN5 1066 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 VCPIP1Q96JH7 1222 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 EDEM2Q9BV94 578 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 MIR1-1HGQ9H1L0 117 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 NDFIP2Q9NV92 336 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 TMEM51Q9NW97 253 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 SERGEFQ9UGK8 458 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 PILRBQ9UKJ0 227 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 NUMA1Q14980 2115 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 DNAH14Q0VDD8 3507 aa16.18■□□□□ 0.18
DDX54-205ENST00000548786 DOCK4Q8N1I0 1966 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 A0A1W2PP55 124 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 LNP1A1A4G5 178 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 FAM47DPA6NHR8 397 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 PLK4O00444 970 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 RNASEH2AO75792 299 aaKnown RBP16.17■□□□□ 0.18
DDX54-205ENST00000548786 IL1BP01584 269 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 GZMAP12544 262 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 DESP17661 470 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 OXTRP30559 389 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 ACVRL1P37023 503 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 METAP1P53582 386 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 KRT83P78385 493 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 IRX4P78413 519 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 ZNF252P-AS1Q0IIN9 211 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 DLG2Q15700 870 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 CST6Q15828 149 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 ACBD5Q5T8D3 534 aaPredicted RBP16.17■□□□□ 0.18
DDX54-205ENST00000548786 MANEALQ5VSG8 457 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 DAB2IPQ5VWQ8 1189 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 LEKR1Q6ZMV7 388 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 VPS36Q86VN1 386 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 KDM1BQ8NB78 822 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 FRS2Q8WU20 508 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 SYN2Q92777 582 aaPredicted RBP16.17■□□□□ 0.18
DDX54-205ENST00000548786 NTAN1Q96AB6 310 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 PPP1R9BQ96SB3 815 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 FAM129BQ96TA1 746 aa16.17■□□□□ 0.18
DDX54-205ENST00000548786 C2orf49Q9BVC5 232 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms