RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 VANGL2Q9ULK5 521 aa21.4■■□□□ 1.02
RITA1-201ENST00000548278 BACE2Q9Y5Z0 518 aa21.4■■□□□ 1.02
RITA1-201ENST00000548278 SLC38A8A6NNN8 435 aa21.39■■□□□ 1.01
RITA1-201ENST00000548278 MATN3O15232 486 aa21.39■■□□□ 1.01
RITA1-201ENST00000548278 IGLV3-27P01718 113 aa21.39■■□□□ 1.01
RITA1-201ENST00000548278 NEK3P51956 506 aa21.39■■□□□ 1.01
RITA1-201ENST00000548278 ITIH4Q14624 930 aa21.39■■□□□ 1.01
RITA1-201ENST00000548278 OTOP3Q7RTS5 596 aa21.39■■□□□ 1.01
RITA1-201ENST00000548278 MIB1Q86YT6 1006 aa21.39■■□□□ 1.01
RITA1-201ENST00000548278 ATP6V0D2Q8N8Y2 350 aa21.39■■□□□ 1.01
RITA1-201ENST00000548278 APOPT1Q96IL0 206 aa21.39■■□□□ 1.01
RITA1-201ENST00000548278 BTN2A3PQ96KV6 586 aa21.39■■□□□ 1.01
RITA1-201ENST00000548278 TTLL2Q9BWV7 592 aa21.39■■□□□ 1.01
RITA1-201ENST00000548278 NOL6Q9H6R4 1146 aaKnown RBP21.39■■□□□ 1.01
RITA1-201ENST00000548278 SLC17A7Q9P2U7 560 aa21.39■■□□□ 1.01
RITA1-201ENST00000548278 HMX2A2RU54 273 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 KIAA0754O94854 1291 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 RPL17P18621 184 aaKnown RBP21.38■■□□□ 1.01
RITA1-201ENST00000548278 ADRA1DP25100 572 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 SF3A3Q12874 501 aaKnown RBP eCLIP21.38■■□□□ 1.01
RITA1-201ENST00000548278 ZKSCAN8Q15776 578 aaPredicted RBP21.38■■□□□ 1.01
RITA1-201ENST00000548278 MARK2Q7KZI7 788 aaKnown RBP21.38■■□□□ 1.01
RITA1-201ENST00000548278 LRRC40Q9H9A6 602 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 BFARQ9NZS9 450 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 PPARGC1AQ9UBK2 798 aaKnown RBP21.38■■□□□ 1.01
RITA1-201ENST00000548278 GOLGA6L7A0A1B0GV03 622 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 LPXNO60711 386 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 KRT38O76015 456 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 PAPOLAP51003 745 aaKnown RBP21.38■■□□□ 1.01
RITA1-201ENST00000548278 PRPSAP1Q14558 356 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 LRRC49Q8IUZ0 686 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 UMODL1-AS1Q8N2C9 162 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 ANKS4BQ8N8V4 417 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 MTBPQ96DY7 904 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 ZYG11BQ9C0D3 744 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 C12orf65Q9H3J6 166 aaKnown RBP21.38■■□□□ 1.01
RITA1-201ENST00000548278 ATP11BQ9Y2G3 1177 aa21.38■■□□□ 1.01
RITA1-201ENST00000548278 IGLV3-10A0A075B6K4 115 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 SLC12A8A0AV02 714 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 RFPL1O75677 317 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 POLBP06746 335 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 RHOQP17081 205 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 OR1D2P34982 312 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 SERPINB9P50453 376 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 BMPR2Q13873 1038 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 SPANXN3Q5MJ09 141 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 ZNF276Q8N554 614 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 DNAAF3Q8N9W5 541 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 UBE2OQ9C0C9 1292 aaKnown RBP21.37■■□□□ 1.01
RITA1-201ENST00000548278 CCSER2Q9H7U1 834 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 UBP1Q9NZI7 540 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 RPS6KL1Q9Y6S9 549 aa21.37■■□□□ 1.01
RITA1-201ENST00000548278 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.36■■□□□ 1.01
RITA1-201ENST00000548278 MYO1CO00159 1063 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 PSMD3O43242 534 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 TLR5O60602 858 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 RING1Q06587 406 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 TIGD7Q6NT04 549 aaPredicted RBP21.36■■□□□ 1.01
RITA1-201ENST00000548278 CGB2Q6NT52 195 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 CES3Q6UWW8 571 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 OTUD6BQ8N6M0 293 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 SPOCK2Q92563 424 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 CEP295NLQ96MC4 621 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 FCRL3Q96P31 734 aaPredicted RBP21.36■■□□□ 1.01
RITA1-201ENST00000548278 FCRL5Q96RD9 977 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 APOL2Q9BQE5 337 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 GLOD4Q9HC38 313 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 TMEM39AQ9NV64 488 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 TMEM248Q9NWD8 314 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 USP15Q9Y4E8 981 aaPredicted RBP21.36■■□□□ 1.01
RITA1-201ENST00000548278 CNTN5O94779 1100 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 DHRS4L1P0CG22 281 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 CCNFP41002 786 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 ETV4P43268 484 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 NPY2RP49146 381 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 NAB1Q13506 487 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 SEPT7Q16181 437 aaKnown RBP21.36■■□□□ 1.01
RITA1-201ENST00000548278 ALFQ53S48 1182 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 FBXL22Q6P050 247 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 TMEM135Q86UB9 458 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 CDKL2Q92772 493 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 SLC17A6Q9P2U8 582 aa21.36■■□□□ 1.01
RITA1-201ENST00000548278 MAGED2Q9UNF1 606 aaPredicted RBP21.36■■□□□ 1.01
RITA1-201ENST00000548278 HMBSP08397 361 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 ALADP13716 330 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 TUFMP49411 452 aaKnown RBP21.35■■□□□ 1.01
RITA1-201ENST00000548278 NDST2P52849 883 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 DNAJC3Q13217 504 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 CERCAMQ5T4B2 595 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 NAPEPLDQ6IQ20 393 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 ZNF449Q6P9G9 518 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 TFAP2DQ7Z6R9 452 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 SPATA22Q8NHS9 363 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 LRRC8CQ8TDW0 803 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 IGSF8Q969P0 613 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 CLSTN3Q9BQT9 956 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 IPO11Q9UI26 975 aaKnown RBP21.35■■□□□ 1.01
RITA1-201ENST00000548278 LTBP2Q14767 1821 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 DRGXA6NNA5 263 aa21.35■■□□□ 1.01
RITA1-201ENST00000548278 CNTFP26441 200 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms