RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 FAM193AP78312 1265 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 IFFO1Q0D2I5 559 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 CBLBQ13191 982 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 POLD3Q15054 466 aaPredicted RBP12.66□□□□□ -0.38
RAB5B-204ENST00000548068 UAP1Q16222 522 aaPredicted RBP12.66□□□□□ -0.38
RAB5B-204ENST00000548068 TEX44Q53QW1 395 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 ALFQ53S48 1182 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 ANKRD22Q5VYY1 191 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 RFWD3Q6PCD5 774 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 ZNF783Q6ZMS7 281 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 Q6ZNB5 142 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 HTR3DQ70Z44 454 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 SETD3Q86TU7 594 aaPredicted RBP12.66□□□□□ -0.38
RAB5B-204ENST00000548068 ZNF354CQ86Y25 554 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 CCDC117Q8IWD4 279 aaPredicted RBP12.66□□□□□ -0.38
RAB5B-204ENST00000548068 TP53INP2Q8IXH6 220 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 FAM217AQ8IXS0 508 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 TDHQ8IZJ6 230 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 KRT222Q8N1A0 295 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 CPXM2Q8N436 756 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 GDPD5Q8WTR4 605 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 LRRC39Q96DD0 335 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 ZIM3Q96PE6 472 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 SLC22A12Q96S37 553 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 CYP2S1Q96SQ9 504 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 CDC42EP4Q9H3Q1 356 aaKnown RBP12.66□□□□□ -0.38
RAB5B-204ENST00000548068 SFXN1Q9H9B4 322 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 SP110Q9HB58 689 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 PIDD1Q9HB75 910 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 SAYSD1Q9NPB0 183 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 HCFC1R1Q9NWW0 138 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 CFAP97Q9P2B7 532 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 DNMT3BQ9UBC3 853 aaKnown RBP12.66□□□□□ -0.38
RAB5B-204ENST00000548068 ZNF212Q9UDV6 495 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 RSPH14Q9UHP6 348 aa12.66□□□□□ -0.38
RAB5B-204ENST00000548068 IPO11Q9UI26 975 aaKnown RBP12.66□□□□□ -0.38
RAB5B-204ENST00000548068 ZFP37Q9Y6Q3 630 aaPredicted RBP12.66□□□□□ -0.38
RAB5B-204ENST00000548068 NUP210Q8TEM1 1887 aaPredicted RBP12.65□□□□□ -0.38
RAB5B-204ENST00000548068 CHD5Q8TDI0 1954 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.65□□□□□ -0.38
RAB5B-204ENST00000548068 CCDC195A0A1B0GUA6 201 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 E2F8A0AVK6 867 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 ILVBLA1L0T0 632 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 E7ESA3 106 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 H0YGN5 161 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 AP3B1O00203 1094 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 PER2O15055 1255 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 RIPK2O43353 540 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 TMEM63AO94886 807 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 PAPLNO95428 1278 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 METTL18O95568 372 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 TTC4O95801 387 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 ABHD2P08910 425 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 MLNP12872 115 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 NRIP1P48552 1158 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 RENBPP51606 427 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 IRAK1P51617 712 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 NRLP54845 237 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 IL10RBQ08334 325 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 PDIA2Q13087 525 aaKnown RBP12.65□□□□□ -0.38
RAB5B-204ENST00000548068 ZNF177Q13360 481 aaPredicted RBP12.65□□□□□ -0.38
RAB5B-204ENST00000548068 SERINC3Q13530 473 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 HNRNPDQ14103 355 aaKnown RBP12.65□□□□□ -0.38
RAB5B-204ENST00000548068 TMCO4Q5TGY1 634 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 RBM23Q86U06 439 aaKnown RBP12.65□□□□□ -0.38
RAB5B-204ENST00000548068 CMTM8Q8IZV2 173 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 TAB3Q8N5C8 712 aaPredicted RBP12.65□□□□□ -0.38
RAB5B-204ENST00000548068 NETO2Q8NC67 525 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 LRRN4Q8WUT4 740 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 SMG7Q92540 1137 aaKnown RBP12.65□□□□□ -0.38
RAB5B-204ENST00000548068 MAML1Q92585 1016 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 MRPL38Q96DV4 380 aaKnown RBP12.65□□□□□ -0.38
RAB5B-204ENST00000548068 HMCESQ96FZ2 354 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 TEKT5Q96M29 485 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 PRICKLE1Q96MT3 831 aaPredicted RBP12.65□□□□□ -0.38
RAB5B-204ENST00000548068 ZNF599Q96NL3 588 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 IL12RB2Q99665 862 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 CCDC77Q9BR77 488 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 SEMA4AQ9H3S1 761 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 NOL6Q9H6R4 1146 aaKnown RBP12.65□□□□□ -0.38
RAB5B-204ENST00000548068 CERS4Q9HA82 394 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 NDFIP2Q9NV92 336 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 FAM53CQ9NYF3 392 aa12.65□□□□□ -0.38
RAB5B-204ENST00000548068 GOLGA8KD6RF30 607 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 GOLGA8MH3BSY2 632 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 LEFTY2O00292 366 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 ALOX15BO15296 676 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 SPAG6O75602 509 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 ANXA9O76027 345 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 JCHAINP01591 159 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 IVLP07476 585 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 RHOCP08134 193 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 TCF3P15923 654 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 PSMB4P28070 264 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 PHBP35232 272 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 IFNAR2P48551 515 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 OXCT1P55809 520 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 GNA12Q03113 381 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 ZBTB17Q13105 803 aa12.64□□□□□ -0.39
RAB5B-204ENST00000548068 TEAD2Q15562 447 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms