RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 SLC1A4P43007 532 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 PXNP49023 591 aaPredicted RBP4.78□□□□□ -1.64
CBX5-203ENST00000547872 ZNF134P52741 427 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 ATXN1P54253 815 aaKnown RBP4.78□□□□□ -1.64
CBX5-203ENST00000547872 NXPH1P58417 271 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 LILRA4P59901 499 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 BOP1Q14137 746 aaKnown RBP4.78□□□□□ -1.64
CBX5-203ENST00000547872 POLD3Q15054 466 aaPredicted RBP4.78□□□□□ -1.64
CBX5-203ENST00000547872 USH1GQ495M9 461 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 C12orf60Q5U649 245 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 APOA5Q6Q788 366 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 TSHZ1Q6ZSZ6 1077 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 CHST15Q7LFX5 561 aaPredicted RBP4.78□□□□□ -1.64
CBX5-203ENST00000547872 CERS3Q8IU89 383 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 SLC15A4Q8N697 577 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 FRAT1Q92837 279 aaPredicted RBP4.78□□□□□ -1.64
CBX5-203ENST00000547872 TOP1MTQ969P6 601 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 FAM136AQ96C01 138 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 CCDC17Q96LX7 622 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 NEK1Q96PY6 1258 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 NELL2Q99435 816 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 AGAP2Q99490 1192 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 ACTRT3Q9BYD9 372 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 LRRC27Q9C0I9 530 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 POMKQ9H5K3 350 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 ENTPD7Q9NQZ7 604 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 ADD3Q9UEY8 706 aaKnown RBP4.78□□□□□ -1.64
CBX5-203ENST00000547872 SHOC2Q9UQ13 582 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 Q9Y3F1 56 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 KAT6AQ92794 2004 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 MYH7BA7E2Y1 1941 aa4.78□□□□□ -1.64
CBX5-203ENST00000547872 NCOR1O75376 2440 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 EMSYQ7Z589 1322 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 ATP2A1O14983 1001 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 DCLK1O15075 740 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 TBX3O15119 743 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 MPPED1O15442 326 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 FRS3O43559 492 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 GH1P01241 217 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 HRGP04196 525 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 TSPY3P0CV98 308 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 TSPY8P0CW00 308 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 CASTP20810 708 aaKnown RBP4.77□□□□□ -1.65
CBX5-203ENST00000547872 PROZP22891 400 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 PEX2P28328 305 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 TDO2P48775 406 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 ARFIP2P53365 341 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 OAZ1P54368 228 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 SP4Q02446 784 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 COASYQ13057 564 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 CTBP1Q13363 440 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 CAMK1Q14012 370 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 RARS2Q5T160 578 aaKnown RBP4.77□□□□□ -1.65
CBX5-203ENST00000547872 KAZNQ674X7 775 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 SFRP4Q6FHJ7 346 aaPredicted RBP4.77□□□□□ -1.65
CBX5-203ENST00000547872 CTR9Q6PD62 1173 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 PCSK4Q6UW60 755 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 DGKHQ86XP1 1220 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 CCDC105Q8IYK2 499 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 THNSL1Q8IYQ7 743 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 C12orf76Q8N812 135 aaPredicted RBP4.77□□□□□ -1.65
CBX5-203ENST00000547872 TDRD5Q8NAT2 981 aaKnown RBP4.77□□□□□ -1.65
CBX5-203ENST00000547872 GPR150Q8NGU9 434 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 SCFD2Q8WU76 684 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 TFAP2BQ92481 460 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 RUBCNQ92622 972 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 KAT2BQ92831 832 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 ATP6V0A1Q93050 837 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 TTC17Q96AE7 1141 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 C8orf48Q96LL4 319 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 LMAN2LQ9H0V9 348 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 ERVK-5Q9HDB9 667 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 GPR108Q9NPR9 543 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 SACM1LQ9NTJ5 587 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 ZSCAN32Q9NX65 697 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 STX8Q9UNK0 236 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 MYH7P12883 1935 aa4.77□□□□□ -1.65
CBX5-203ENST00000547872 ZFHX2Q9C0A1 2572 aaPredicted RBP4.76□□□□□ -1.65
CBX5-203ENST00000547872 ZDBF2Q9HCK1 2354 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 A0A087WWL8 130 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 C17orf102A2RUQ5 167 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 CCDC151A5D8V7 595 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 ISM1B1AKI9 464 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 MYO1FO00160 1098 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 NMT2O60551 498 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 RB1P06400 928 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 HMGB1P09429 215 aaKnown RBP4.76□□□□□ -1.65
CBX5-203ENST00000547872 SRGAP2BP0DMP2 458 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 TYRP1P17643 537 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 RHCEP18577 417 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 LRPAP1P30533 357 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 PBX3P40426 434 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 SUMO3P55854 103 aaPredicted RBP4.76□□□□□ -1.65
CBX5-203ENST00000547872 WNT3P56703 355 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 RHDQ02161 417 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 KRT17Q04695 432 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 DNAH14Q0VDD8 3507 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 ZNF169Q14929 603 aaPredicted RBP4.76□□□□□ -1.65
CBX5-203ENST00000547872 PTPRRQ15256 657 aa4.76□□□□□ -1.65
CBX5-203ENST00000547872 TRIM71Q2Q1W2 868 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms