RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 NLRP14Q86W24 1093 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 CACUL1Q86Y37 369 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 CNGA4Q8IV77 575 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 TBC1D31Q96DN5 1066 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 ARHGEF26Q96DR7 871 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 PSMB7Q99436 277 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 DEF6Q9H4E7 631 aa19.22■□□□□ 0.67
PRPF40B-206ENST00000547764 ILVBLA1L0T0 632 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 SIN3BO75182 1162 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 RNF8O76064 485 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 EPN2O95208 641 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 RHOQP17081 205 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 NNMTP40261 264 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 VASPP50552 380 aaPredicted RBP19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 ZNF75DP51815 510 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 KRT83P78385 493 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 C9orf64Q5T6V5 341 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 ZNF783Q6ZMS7 281 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 OR7D4Q8NG98 312 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 C2orf49Q9BVC5 232 aaPredicted RBP19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 NUP85Q9BW27 656 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 RETREG1Q9H6L5 497 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 FBRSQ9HAH7 460 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 ITM2CQ9NQX7 267 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 NDFIP2Q9NV92 336 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 GPATCH2LQ9NWQ4 482 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 USP36Q9P275 1121 aaKnown RBP19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 PCSK1NQ9UHG2 260 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 SLC25A13Q9UJS0 675 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 PLXND1Q9Y4D7 1925 aa19.21■□□□□ 0.67
PRPF40B-206ENST00000547764 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 EDDM13A0A1B0GTR0 161 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 TARSL2A2RTX5 802 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 CREB3O43889 395 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 AKR1B10O60218 316 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 SNAP91O60641 907 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 LRCH4O75427 683 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 C7P10643 843 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 ACADMP11310 421 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 TGM1P22735 817 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 MIPP30301 263 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 TPMTP51580 245 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 RPS14P62263 151 aaKnown RBP19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 GNA12Q03113 381 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 SPEM2Q0P670 501 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 SEMA3BQ13214 749 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 SLC36A4Q6YBV0 504 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 LPCAT2Q7L5N7 544 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 TMEFF1Q8IYR6 380 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 DCAF4L2Q8NA75 395 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 PTPRN2Q92932 1015 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 PEBP4Q96S96 227 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 ARRDC1-AS1Q9H2J1 176 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 NHEJ1Q9H9Q4 299 aaPredicted RBP19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 PARD6AQ9NPB6 346 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 TMEM248Q9NWD8 314 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 DNAI1Q9UI46 699 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 VPS51Q9UID3 782 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 THADAQ6YHU6 1953 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 ZNF292O60281 2723 aa19.2■□□□□ 0.66
PRPF40B-206ENST00000547764 ATP9BO43861 1147 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 PRPSAP2O60256 369 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 MT-CO1P00395 513 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 VAV1P15498 845 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 EPHB2P29323 1055 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 MAPKAPK2P49137 400 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 ACAP1Q15027 740 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 ERMARDQ5T6L9 678 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 DAB2IPQ5VWQ8 1189 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 CYP4V2Q6ZWL3 525 aaPredicted RBP19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 KIAA2013Q8IYS2 634 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 TC2NQ8N9U0 490 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 FRS2Q8WU20 508 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 MRFAP1L1Q96HT8 127 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 BTBD6Q96KE9 485 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 CCDC42Q96M95 316 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 EPAS1Q99814 870 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 SPON2Q9BUD6 331 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 SNRNP25Q9BV90 132 aaKnown RBP19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 PACSIN1Q9BY11 444 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 RSPH9Q9H1X1 276 aaPredicted RBP19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 ANAPC7Q9UJX3 599 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 AP4E1Q9UPM8 1137 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 PCDHGA5Q9Y5G8 931 aa19.19■□□□□ 0.66
PRPF40B-206ENST00000547764 LRP3O75074 770 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 GLDCP23378 1020 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 CD6P30203 668 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 PCK1P35558 622 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 PTGER3P43115 390 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 DHPSP49366 369 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 RPL6Q02878 288 aaKnown RBP19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 CREB5Q02930 508 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 PIGHQ14442 188 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 DLG2Q15700 870 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 CA9Q16790 459 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 ACCSLQ4AC99 568 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 SPDYCQ5MJ68 293 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 ZNF776Q68DI1 518 aaPredicted RBP19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 SH2D3CQ8N5H7 860 aa19.18■□□□□ 0.66
PRPF40B-206ENST00000547764 DEFB119Q8N690 84 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms