RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 TEAD4Q15561 434 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 ALFQ53S48 1182 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 TRNP1Q6NT89 227 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 XYLT1Q86Y38 959 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 ZDHHC17Q8IUH5 632 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 OR2T34Q8NGX1 318 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 RHBDD1Q8TEB9 315 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 ADAMTS14Q8WXS8 1223 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 C18orf8Q96DM3 657 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 TBCBQ99426 244 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 PDCL3Q9H2J4 239 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 WDCPQ9H6R7 721 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 TOR4AQ9NXH8 423 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 TAB2Q9NYJ8 693 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 DACH1Q9UI36 760 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 FZD4Q9ULV1 537 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 TBC1D30Q9Y2I9 924 aa13.73□□□□□ -0.21
CPSF6-204ENST00000547486 ZZEF1O43149 2961 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 PES1O00541 588 aaKnown RBP13.72□□□□□ -0.21
CPSF6-204ENST00000547486 VILLO15195 856 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 ATP9BO43861 1147 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 CLDN11O75508 207 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 ADH1BP00325 375 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 MT-CO1P00395 513 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 CAPNS1P04632 268 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 MMEP08473 750 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 ATXN1LP0C7T5 689 aaKnown RBP13.72□□□□□ -0.21
CPSF6-204ENST00000547486 RDXP35241 583 aaKnown RBP13.72□□□□□ -0.21
CPSF6-204ENST00000547486 NNMTP40261 264 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 KLK7P49862 253 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 SULT1E1P49888 294 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 VASPP50552 380 aaPredicted RBP13.72□□□□□ -0.21
CPSF6-204ENST00000547486 ADPRHP54922 357 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 OXCT1P55809 520 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 RACK1P63244 317 aaKnown RBP13.72□□□□□ -0.21
CPSF6-204ENST00000547486 IL9RQ01113 521 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 ELAVL3Q14576 367 aaKnown RBP13.72□□□□□ -0.21
CPSF6-204ENST00000547486 DLG2Q15700 870 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 SLC25A52Q3SY17 297 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 ACCSLQ4AC99 568 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.72□□□□□ -0.21
CPSF6-204ENST00000547486 CLEC17AQ6ZS10 378 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 SND1Q7KZF4 910 aaKnown RBP eCLIP13.72□□□□□ -0.21
CPSF6-204ENST00000547486 ERICH1Q86X53 443 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 OR14C36Q8NHC7 312 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 CPA5Q8WXQ8 436 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 FAM131CQ96AQ9 280 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 PGAP3Q96FM1 320 aaPredicted RBP13.72□□□□□ -0.21
CPSF6-204ENST00000547486 PSMB7Q99436 277 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 STK33Q9BYT3 514 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 TMEM59LQ9UK28 342 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 RALYQ9UKM9 306 aaKnown RBP13.72□□□□□ -0.21
CPSF6-204ENST00000547486 PPM1HQ9ULR3 514 aa13.72□□□□□ -0.21
CPSF6-204ENST00000547486 A0A1W2PR77 199 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 LRRC72A6NJI9 287 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 DRGXA6NNA5 263 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 F8VZ95 297 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 K7ERQ8 282 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 FLRT2O43155 660 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 RTN2O75298 545 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 EEF1GP26641 437 aaKnown RBP13.71□□□□□ -0.21
CPSF6-204ENST00000547486 FLT3P36888 993 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 SCNN1AP37088 669 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 CCR5P51681 352 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 CDH4P55283 916 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 PPP2CBP62714 309 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 PPP2CAP67775 309 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 DEUP1Q05D60 604 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 SFSWAPQ12872 951 aaKnown RBP13.71□□□□□ -0.21
CPSF6-204ENST00000547486 MTA1Q13330 715 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 SHBQ15464 509 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 RAB6CQ53S08 254 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 CT47A1Q5JQC4 288 aaPredicted RBP13.71□□□□□ -0.21
CPSF6-204ENST00000547486 BRMS1LQ5PSV4 323 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 FAM102AQ5T9C2 384 aaPredicted RBP13.71□□□□□ -0.21
CPSF6-204ENST00000547486 BNIPLQ7Z465 357 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 ADAT2Q7Z6V5 191 aaKnown RBP13.71□□□□□ -0.21
CPSF6-204ENST00000547486 SH2D3CQ8N5H7 860 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 ENOX1Q8TC92 643 aaKnown RBP13.71□□□□□ -0.21
CPSF6-204ENST00000547486 SLC20A1Q8WUM9 679 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 C1orf74Q96LT6 269 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 SPAG5Q96R06 1193 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 ACE2Q9BYF1 805 aaPredicted RBP13.71□□□□□ -0.21
CPSF6-204ENST00000547486 RAB6CQ9H0N0 254 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 VPS16Q9H269 839 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 GANQ9H2C0 597 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 RRN3Q9NYV6 651 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 ARHGAP20Q9P2F6 1191 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 VPS28Q9UK41 221 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 STAP1Q9ULZ2 295 aa13.71□□□□□ -0.21
CPSF6-204ENST00000547486 TBC1D3DA0A087WVF3 549 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 TBC1D3IA0A087WXS9 549 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 TBC1D3EA0A087X179 549 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 TBC1D3KA0A087X1G2 549 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 A0A0D9SEW6 157 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 TMEM8BA6NDV4 472 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 TBC1D3FA6NER0 549 aaPredicted RBP13.7□□□□□ -0.22
CPSF6-204ENST00000547486 SRRM3A6NNA2 597 aaPredicted RBP13.7□□□□□ -0.22
CPSF6-204ENST00000547486 TBC1D3LB9A6J9 549 aa13.7□□□□□ -0.22
CPSF6-204ENST00000547486 GOLGA8SH3BPF8 625 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms