RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.32■□□□□ 0.2
DDX54-204ENST00000546898 TTC34A8MYJ7 566 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 SLC30A4O14863 429 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 CCP110O43303 1012 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 CBFA2T2O43439 604 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 SRGAP2O75044 1071 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 RTN2O75298 545 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 STK19P49842 368 aaPredicted RBP16.32■□□□□ 0.2
DDX54-204ENST00000546898 AIF1P55008 147 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 KRT83P78385 493 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 SCAPQ12770 1279 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 RAB6CQ53S08 254 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 TDRD12Q587J7 1177 aaKnown RBP16.32■□□□□ 0.2
DDX54-204ENST00000546898 SYCP2LQ5T4T6 812 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 ARTNQ5T4W7 220 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 C9orf64Q5T6V5 341 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 MANEALQ5VSG8 457 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 PLEKHA7Q6IQ23 1121 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 ZNF783Q6ZMS7 281 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 VPS36Q86VN1 386 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 SLC41A1Q8IVJ1 513 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 DCAF4L2Q8NA75 395 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 CEP76Q8TAP6 659 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 TRIM11Q96F44 468 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 RPL10LQ96L21 214 aaKnown RBP16.32■□□□□ 0.2
DDX54-204ENST00000546898 HSPA12BQ96MM6 686 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 RAB6CQ9H0N0 254 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 MPP6Q9NZW5 540 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 ZNF212Q9UDV6 495 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 OR12D3Q9UGF7 316 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 SLCO3A1Q9UIG8 710 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 CAPN11Q9UMQ6 739 aa16.32■□□□□ 0.2
DDX54-204ENST00000546898 PCDH15Q96QU1 1955 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 ATXN2Q99700 1313 aaKnown RBP16.31■□□□□ 0.2
DDX54-204ENST00000546898 ILVBLA1L0T0 632 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 TMCO5BA8MYB1 307 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 DDX3XO00571 662 aaKnown RBP eCLIP16.31■□□□□ 0.2
DDX54-204ENST00000546898 ATP9BO43861 1147 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 GDF9O60383 454 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 ITPKAP23677 461 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 OR1E1P30953 314 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 RPL7AP62424 266 aaKnown RBP16.31■□□□□ 0.2
DDX54-204ENST00000546898 ELAVL3Q14576 367 aaKnown RBP16.31■□□□□ 0.2
DDX54-204ENST00000546898 WDR45BQ5MNZ6 344 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 HGSNATQ68CP4 663 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 TCEAL6Q6IPX3 200 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 USP30Q70CQ3 517 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 ERMP1Q7Z2K6 904 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 TFAP2DQ7Z6R9 452 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 CCDC185Q8N715 623 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 PTPRN2Q92932 1015 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 TCEAL3Q969E4 200 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 EDEM2Q9BV94 578 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 GPR174Q9BXC1 333 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 XPO4Q9C0E2 1151 aaKnown RBP16.31■□□□□ 0.2
DDX54-204ENST00000546898 PABPC3Q9H361 631 aaKnown RBP16.31■□□□□ 0.2
DDX54-204ENST00000546898 MTG2Q9H4K7 406 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 SUSD2Q9UGT4 822 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 HS3ST2Q9Y278 367 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 LUC7L2Q9Y383 392 aaKnown RBP16.31■□□□□ 0.2
DDX54-204ENST00000546898 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.31■□□□□ 0.21e-7■■■■□ 21.5
DDX54-204ENST00000546898 SCINQ9Y6U3 715 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 ADAMTS9Q9P2N4 1935 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 DNAH14Q0VDD8 3507 aa16.31■□□□□ 0.2
DDX54-204ENST00000546898 LNP1A1A4G5 178 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 MEI4A8MW99 385 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 GYPCP04921 128 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 SERPING1P05155 500 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 MYBL1P10243 752 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 SKILP12757 684 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 RHOQP17081 205 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 MAPKAPK2P49137 400 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 MAMLD1Q13495 774 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 NFKBIBQ15653 356 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 CST6Q15828 149 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 DUOXA1Q1HG43 343 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 TRIM61Q5EBN2 209 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 EFHC2Q5JST6 749 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 SLC23A3Q6PIS1 610 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 SLFN11Q7Z7L1 901 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 SH2D3CQ8N5H7 860 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 DEFB119Q8N690 84 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 FRS2Q8WU20 508 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 TBC1D31Q96DN5 1066 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 PSMB7Q99436 277 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 NUSAP1Q9BXS6 441 aaKnown RBP16.3■□□□□ 0.2
DDX54-204ENST00000546898 BTBD1Q9H0C5 482 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 ISCUQ9H1K1 167 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 SGK2Q9HBY8 427 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 TMEM74BQ9NUR3 256 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 VPS51Q9UID3 782 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 NCKAP1Q9Y2A7 1128 aa16.3■□□□□ 0.2
DDX54-204ENST00000546898 CXorf51AA0A1B0GTR3 108 aa16.29■□□□□ 0.2
DDX54-204ENST00000546898 PATE3B3GLJ2 98 aa16.29■□□□□ 0.2
DDX54-204ENST00000546898 ALOX15BO15296 676 aa16.29■□□□□ 0.2
DDX54-204ENST00000546898 ATMINO43313 823 aaPredicted RBP16.29■□□□□ 0.2
DDX54-204ENST00000546898 LRIG2O94898 1065 aa16.29■□□□□ 0.2
DDX54-204ENST00000546898 ADH1BP00325 375 aa16.29■□□□□ 0.2
DDX54-204ENST00000546898 FTLP02792 175 aaPredicted RBP16.29■□□□□ 0.2
DDX54-204ENST00000546898 PLEKP08567 350 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms