RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.04□□□□□ -1.28
CCDC60-205ENST00000546345 TNFSF13BQ9Y275 285 aa7.04□□□□□ -1.28
CCDC60-205ENST00000546345 TDRD6O60522 2096 aaKnown RBP7.04□□□□□ -1.28
CCDC60-205ENST00000546345 FBN2P35556 2912 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 CCDC151A5D8V7 595 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 FADS2P1A8MWK0 482 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 AGRPO00253 132 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 FGF10O15520 208 aaPredicted RBP7.03□□□□□ -1.28
CCDC60-205ENST00000546345 BRINP1O60477 761 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 ITGAVP06756 1048 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 GLI1P08151 1106 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 PNMA6AP0CW24 399 aaPredicted RBP7.03□□□□□ -1.28
CCDC60-205ENST00000546345 SKILP12757 684 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 CPA1P15085 419 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 MCM3P25205 808 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 DDX6P26196 483 aaKnown RBP eCLIP7.03□□□□□ -1.28
CCDC60-205ENST00000546345 LRPAP1P30533 357 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 HNRNPH2P55795 449 aaKnown RBP7.03□□□□□ -1.28
CCDC60-205ENST00000546345 KDSRQ06136 332 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 KRT32Q14532 448 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 VEPH1Q14D04 833 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 ZRSR1Q15695 479 aaKnown RBP7.03□□□□□ -1.28
CCDC60-205ENST00000546345 SLC10A6Q3KNW5 377 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 MGAT5BQ3V5L5 792 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 HSF5Q4G112 596 aaPredicted RBP7.03□□□□□ -1.28
CCDC60-205ENST00000546345 SLC39A12Q504Y0 691 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 EARS2Q5JPH6 523 aaKnown RBP7.03□□□□□ -1.28
CCDC60-205ENST00000546345 EOGTQ5NDL2 527 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 SDHAF4Q5VUM1 108 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 HLA-DQA1Q5Y7H0 255 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 PPP4R3AQ6IN85 833 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 FBXO38Q6PIJ6 1188 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 CEP128Q6ZU80 1094 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 CCDC91Q7Z6B0 441 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 LRRTM3Q86VH5 581 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 TRIM59Q8IWR1 403 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 BLIDQ8IZY5 108 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 TMEM52Q8NDY8 209 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 SH3RF2Q8TEC5 729 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 DNASE2BQ8WZ79 361 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 ERCC4Q92889 916 aaPredicted RBP7.03□□□□□ -1.28
CCDC60-205ENST00000546345 MRGPRX3Q96LB0 322 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 ZNF830Q96NB3 372 aaPredicted RBP7.03□□□□□ -1.28
CCDC60-205ENST00000546345 CYP2S1Q96SQ9 504 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 CDC6Q99741 560 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 MCMBPQ9BTE3 642 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 SLC26A6Q9BXS9 759 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 ZDHHC5Q9C0B5 715 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 ZCWPW1Q9H0M4 648 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 TMEM206Q9H813 350 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 CPNE5Q9HCH3 593 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 SH3GLB2Q9NR46 395 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 MTMR6Q9Y217 621 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 GPR55Q9Y2T6 319 aaPredicted RBP7.03□□□□□ -1.28
CCDC60-205ENST00000546345 PCDHGB2Q9Y5G2 931 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 CYP46A1Q9Y6A2 500 aa7.03□□□□□ -1.28
CCDC60-205ENST00000546345 STK36Q9NRP7 1315 aa7.02□□□□□ -1.28
CCDC60-205ENST00000546345 SPENQ96T58 3664 aaKnown RBP7.02□□□□□ -1.29
CCDC60-205ENST00000546345 C2orf78A6NCI8 922 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 BECN2A8MW95 431 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 CBX4O00257 560 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 RRP8O43159 456 aaKnown RBP7.02□□□□□ -1.29
CCDC60-205ENST00000546345 TNFSF14O43557 240 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 ERLIN1O75477 346 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 KAT7O95251 611 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 NFATC1O95644 943 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 CER1O95813 267 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 CPP00450 1065 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 CXCL8P10145 99 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 HAPLN1P10915 354 aaPredicted RBP7.02□□□□□ -1.29
CCDC60-205ENST00000546345 IFNAR1P17181 557 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 TYMPP19971 482 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 ACTN2P35609 894 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 MATKP42679 507 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 SEPHS1P49903 392 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 NLRP5P59047 1200 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 RHDQ02161 417 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 SPAG1Q07617 926 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 DMP1Q13316 513 aaPredicted RBP7.02□□□□□ -1.29
CCDC60-205ENST00000546345 BYSLQ13895 437 aaKnown RBP7.02□□□□□ -1.29
CCDC60-205ENST00000546345 ZSCAN26Q16670 478 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 CCDC142Q17RM4 750 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 HLA-BQ31612 363 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 CCDC157Q569K6 752 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 GTF2IRD2BQ6EKJ0 949 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 CYP2R1Q6VVX0 501 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 NEK8Q86SG6 692 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 GTF2IRD2Q86UP8 949 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 TMPRSS12Q86WS5 348 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 CEP57L1Q8IYX8 460 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 MCPH1Q8NEM0 835 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 CCDC26Q8TAB7 109 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 ERLEC1Q96DZ1 483 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 ACO2Q99798 780 aaKnown RBP7.02□□□□□ -1.29
CCDC60-205ENST00000546345 LLPHQ9BRT6 129 aaKnown RBP7.02□□□□□ -1.29
CCDC60-205ENST00000546345 LGR4Q9BXB1 951 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 FAM124BQ9H5Z6 455 aaPredicted RBP7.02□□□□□ -1.29
CCDC60-205ENST00000546345 NCOA5Q9HCD5 579 aaKnown RBP7.02□□□□□ -1.29
CCDC60-205ENST00000546345 POLD4Q9HCU8 107 aa7.02□□□□□ -1.29
CCDC60-205ENST00000546345 ARFGAP3Q9NP61 516 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms