RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 ZNF135P52742 658 aaPredicted RBP17.25■□□□□ 0.35
LTBR-215ENST00000546296 NAP1L1P55209 391 aaKnown RBP17.25■□□□□ 0.35
LTBR-215ENST00000546296 SLC25A11Q02978 314 aaKnown RBP17.25■□□□□ 0.35
LTBR-215ENST00000546296 IL31Q6EBC2 164 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 TXNRD3NBQ6F5E7 133 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 KIAA1211LQ6NV74 962 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 ZC3H14Q6PJT7 736 aaKnown RBP17.25■□□□□ 0.35
LTBR-215ENST00000546296 RFX8Q6ZV50 586 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 LONP2Q86WA8 852 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 ZNF354CQ86Y25 554 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 CPNE8Q86YQ8 564 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 TXLNBQ8N3L3 684 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 RTL3Q8N8U3 475 aaKnown RBP17.25■□□□□ 0.35
LTBR-215ENST00000546296 OR7D4Q8NG98 312 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 ATP13A1Q9HD20 1204 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 FAM86C1Q9NVL1 165 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 ZNF212Q9UDV6 495 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 NEU3Q9UQ49 428 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 PCDHGA2Q9Y5H1 932 aa17.25■□□□□ 0.35
LTBR-215ENST00000546296 ATG2BQ96BY7 2078 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 A0A0A6YYK5 440 aaPredicted RBP17.24■□□□□ 0.35
LTBR-215ENST00000546296 CBX4O00257 560 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 AXIN1O15169 862 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 NRDCO43847 1150 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 RAMP2O60895 175 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 KRT7P08729 469 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 GOT1P17174 413 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 STK19P49842 368 aaPredicted RBP17.24■□□□□ 0.35
LTBR-215ENST00000546296 ENPP2Q13822 863 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 POLD3Q15054 466 aaPredicted RBP17.24■□□□□ 0.35
LTBR-215ENST00000546296 DPYSL2Q16555 572 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 WDR5BQ86VZ2 330 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 ZNF366Q8N895 744 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 KDM1BQ8NB78 822 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 KCTD6Q8NC69 237 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 CCDC112Q8NEF3 446 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 MRGPRX3Q96LB0 322 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 DESI2Q9BSY9 194 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 MAGEH1Q9H213 219 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 TMEM245Q9H330 911 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 NDFIP2Q9NV92 336 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 CWC15Q9P013 229 aaKnown RBP17.24■□□□□ 0.35
LTBR-215ENST00000546296 EBF1Q9UH73 591 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 SLCO3A1Q9UIG8 710 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 HPCAL4Q9UM19 191 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 REXO2Q9Y3B8 237 aaKnown RBP17.24■□□□□ 0.35
LTBR-215ENST00000546296 ARIH1Q9Y4X5 557 aaPredicted RBP17.24■□□□□ 0.35
LTBR-215ENST00000546296 R4GN57 208 aa17.24■□□□□ 0.35
LTBR-215ENST00000546296 WASH4PA8MWX3 477 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 TTC34A8MYJ7 566 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 SPOPO43791 374 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 SNAP91O60641 907 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 TNNT1P13805 278 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 ACVRL1P37023 503 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 SLC1A1P43005 524 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 HCAR3P49019 387 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 VAV2P52735 878 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 CDH6P55285 790 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 TAS2R40P59535 323 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 ACCSLQ4AC99 568 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 DCAF4L2Q8NA75 395 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 MDGA1Q8NFP4 955 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 NELL1Q92832 810 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 PSMB7Q99436 277 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 PCDH18Q9HCL0 1135 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 VPS51Q9UID3 782 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 CACNA1IQ9P0X4 2223 aa17.23■□□□□ 0.35
LTBR-215ENST00000546296 WDFY4Q6ZS81 3184 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 CCDC163A0A0D9SF12 145 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 RCCD1A6NED2 376 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 BUB1BO60566 1050 aaPredicted RBP17.22■□□□□ 0.35
LTBR-215ENST00000546296 ERCC2P18074 760 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 HADHBP55084 474 aaKnown RBP17.22■□□□□ 0.35
LTBR-215ENST00000546296 KIF5AQ12840 1032 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 HNRNPA1L2Q32P51 320 aaKnown RBP17.22■□□□□ 0.35
LTBR-215ENST00000546296 ATP13A4Q4VNC1 1196 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 USP39Q53GS9 565 aaKnown RBP17.22■□□□□ 0.35
LTBR-215ENST00000546296 ODF2Q5BJF6 829 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 RETSATQ6NUM9 610 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 POLNQ7Z5Q5 900 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 RASSF3Q86WH2 238 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 MAP7D3Q8IWC1 876 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 LRRC8AQ8IWT6 810 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 ATP11CQ8NB49 1132 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 ZBTB44Q8NCP5 570 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 ARHGEF2Q92974 986 aaKnown RBP17.22■□□□□ 0.35
LTBR-215ENST00000546296 CALR3Q96L12 384 aaKnown RBP17.22■□□□□ 0.35
LTBR-215ENST00000546296 TPSD1Q9BZJ3 242 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 HYOU1Q9Y4L1 999 aa17.22■□□□□ 0.35
LTBR-215ENST00000546296 EDDM13A0A1B0GTR0 161 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 RASA4BC9J798 803 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 ARHGAP6O43182 974 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 RASA4O43374 803 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 BUB1O43683 1085 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 GABRG2P18507 467 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 COMTP21964 271 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 GLDCP23378 1020 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 YBEYP58557 167 aaPredicted RBP17.21■□□□□ 0.35
LTBR-215ENST00000546296 SLC20A2Q08357 652 aa17.21■□□□□ 0.35
LTBR-215ENST00000546296 CAMK2GQ13555 558 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms