RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CD48P09326 243 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 CCDC175P0C221 793 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 ERCC2P18074 760 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 IL4RP24394 825 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 ARL4AP40617 200 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 IL12RB1P42701 662 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 CTSOP43234 321 aaPredicted RBP21■□□□□ 0.95
HMGA2-211ENST00000545998 CXCL12P48061 93 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 ECT2LQ008S8 904 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 GNA12Q03113 381 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 SULT2A1Q06520 285 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 KRT81Q14533 505 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 RHOT1Q8IXI2 618 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 KCTD6Q8NC69 237 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 OR7D4Q8NG98 312 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 CSPG4P5Q96PW8 444 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 GABRG3Q99928 467 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 TSGA10Q9BZW7 698 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 NOL6Q9H6R4 1146 aaKnown RBP21■□□□□ 0.95
HMGA2-211ENST00000545998 KLHL11Q9NVR0 708 aa21■□□□□ 0.95
HMGA2-211ENST00000545998 RCOR3Q9P2K3 495 aaPredicted RBP21■□□□□ 0.95
HMGA2-211ENST00000545998 MACROD2A1Z1Q3 448 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 GRID2IPA4D2P6 1211 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 WASH3PC4AMC7 463 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 LAMTOR5O43504 91 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 DPYSL3Q14195 570 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 PDK2Q15119 407 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 EOGTQ5NDL2 527 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 ZNF662Q6ZS27 426 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 UMODL1-AS1Q8N2C9 162 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 LRRC57Q8N9N7 239 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 MYO19Q96H55 970 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 MRGPRX3Q96LB0 322 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 ZNF830Q96NB3 372 aaPredicted RBP20.99■□□□□ 0.95
HMGA2-211ENST00000545998 MAGEH1Q9H213 219 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 DONSONQ9NYP3 566 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 ERVW-1Q9UQF0 538 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 STON1Q9Y6Q2 735 aa20.99■□□□□ 0.95
HMGA2-211ENST00000545998 RAMP2O60895 175 aa20.98■□□□□ 0.95
HMGA2-211ENST00000545998 SRPRAP08240 638 aaKnown RBP20.98■□□□□ 0.95
HMGA2-211ENST00000545998 WASP42768 502 aa20.98■□□□□ 0.95
HMGA2-211ENST00000545998 IFI16Q16666 785 aaKnown RBP20.98■□□□□ 0.95
HMGA2-211ENST00000545998 FNDC3BQ53EP0 1204 aaKnown RBP20.98■□□□□ 0.95
HMGA2-211ENST00000545998 SDE2Q6IQ49 451 aa20.98■□□□□ 0.95
HMGA2-211ENST00000545998 RNF10Q8N5U6 811 aaKnown RBP20.98■□□□□ 0.95
HMGA2-211ENST00000545998 DCAF4L2Q8NA75 395 aa20.98■□□□□ 0.95
HMGA2-211ENST00000545998 RAPGEF5Q92565 580 aa20.98■□□□□ 0.95
HMGA2-211ENST00000545998 ARHGEF2Q92974 986 aaKnown RBP20.98■□□□□ 0.95
HMGA2-211ENST00000545998 C2orf49Q9BVC5 232 aaPredicted RBP20.98■□□□□ 0.95
HMGA2-211ENST00000545998 ACE2Q9BYF1 805 aaPredicted RBP20.98■□□□□ 0.95
HMGA2-211ENST00000545998 KLC2Q9H0B6 622 aa20.98■□□□□ 0.95
HMGA2-211ENST00000545998 TMEM245Q9H330 911 aa20.98■□□□□ 0.95
HMGA2-211ENST00000545998 K7ESF4 209 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 DCLK1O15075 740 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 PSTPIP1O43586 416 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 KRT86O43790 486 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 KDELR1P24390 212 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 ACVRL1P37023 503 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 ETFBP38117 255 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 CCDC173Q0VFZ6 552 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 MMRN1Q13201 1228 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 POLD3Q15054 466 aaPredicted RBP20.97■□□□□ 0.95
HMGA2-211ENST00000545998 CRY1Q16526 586 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 TMEM92Q6UXU6 159 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 MAP7D3Q8IWC1 876 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 KDM1BQ8NB78 822 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 KIAA1524Q8TCG1 905 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 ZNF670Q9BS34 389 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 CD248Q9HCU0 757 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 ATP13A1Q9HD20 1204 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 VPS51Q9UID3 782 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 SLC8A2Q9UPR5 921 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 A0A1W2PQF6 199 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 C3orf70A6NLC5 250 aaPredicted RBP20.97■□□□□ 0.95
HMGA2-211ENST00000545998 SNAP91O60641 907 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 TDGF1P13385 188 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 TNNT1P13805 278 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 HOXB2P14652 356 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 AMPD1P23109 780 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 PRKCHP24723 683 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 STK19P49842 368 aaPredicted RBP20.97■□□□□ 0.95
HMGA2-211ENST00000545998 VASPP50552 380 aaPredicted RBP20.97■□□□□ 0.95
HMGA2-211ENST00000545998 YBEYP58557 167 aaPredicted RBP20.97■□□□□ 0.95
HMGA2-211ENST00000545998 ANGPT1Q15389 498 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 ZFYVE27Q5T4F4 411 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 SERPINA13PQ6UXR4 307 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 FAF2Q96CS3 445 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 RPL10LQ96L21 214 aaKnown RBP20.97■□□□□ 0.95
HMGA2-211ENST00000545998 SPON2Q9BUD6 331 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 CALN1Q9BXU9 219 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 LRRC19Q9H756 370 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 ETNK2Q9NVF9 386 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 DDX56Q9NY93 547 aaKnown RBP20.97■□□□□ 0.95
HMGA2-211ENST00000545998 FBXO4Q9UKT5 387 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 GUCA1BQ9UMX6 200 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 PPP2R2CQ9Y2T4 447 aa20.97■□□□□ 0.95
HMGA2-211ENST00000545998 PALMO75781 387 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 ZMPSTE24O75844 475 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 COL9A1P20849 921 aa20.96■□□□□ 0.95
HMGA2-211ENST00000545998 GLDCP23378 1020 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms