RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 SLC6A17Q9H1V8 727 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 SGK2Q9HBY8 427 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 PARVAQ9NVD7 372 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 DONSONQ9NYP3 566 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 FARP1Q9Y4F1 1045 aaPredicted RBP12.14□□□□□ -0.47
HDAC4-216ENST00000544989 NUP205Q92621 2012 aa12.14□□□□□ -0.47
HDAC4-216ENST00000544989 ILVBLA1L0T0 632 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 ALOX15BO15296 676 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 ATP9BO43861 1147 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 SYPP08247 313 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 SERPINF2P08697 491 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 MYBL1P10243 752 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 ITPKAP23677 461 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 MZF1P28698 734 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-216ENST00000544989 OR1E1P30953 314 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 CLCN6P51797 869 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 ATXN1P54253 815 aaKnown RBP12.13□□□□□ -0.47
HDAC4-216ENST00000544989 RPS14P62263 151 aaKnown RBP12.13□□□□□ -0.47
HDAC4-216ENST00000544989 GFPT1Q06210 699 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-216ENST00000544989 SLC20A2Q08357 652 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 SCAPQ12770 1279 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 CCDC6Q16204 474 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 CDO1Q16878 200 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 C9orf64Q5T6V5 341 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 STPG1Q5TH74 334 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 FAM46CQ5VWP2 391 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 TRNP1Q6NT89 227 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 WDR59Q6PJI9 974 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 ARMCX6Q7L4S7 300 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 C14orf80Q86SX3 495 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 ZNF683Q8IZ20 524 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 RGL4Q8IZJ4 473 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 APCDD1Q8J025 514 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 FRMD1Q8N878 549 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 DCAF4L2Q8NA75 395 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 ERLEC1Q96DZ1 483 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 NCAPGQ9BPX3 1015 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 CNPY3Q9BT09 278 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 SYT11Q9BT88 431 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 GPR174Q9BXC1 333 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 ZDHHC5Q9C0B5 715 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 TTYH3Q9C0H2 523 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 PABPC3Q9H361 631 aaKnown RBP12.13□□□□□ -0.47
HDAC4-216ENST00000544989 HAUS4Q9H6D7 363 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 TMEM9BQ9NQ34 198 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 OR12D3Q9UGF7 316 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 SLC6A14Q9UN76 642 aa12.13□□□□□ -0.47
HDAC4-216ENST00000544989 MUC22E2RYF6 1773 aaPredicted RBP12.13□□□□□ -0.47
HDAC4-216ENST00000544989 LNP1A1A4G5 178 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 METTL12A8MUP2 240 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 TTC34A8MYJ7 566 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 EIF3CLB5ME19 914 aaKnown RBP12.12□□□□□ -0.47
HDAC4-216ENST00000544989 CBFA2T2O43439 604 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 SRGAP2O75044 1071 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 SIN3BO75182 1162 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 HTR7P34969 479 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 RFC1P35251 1148 aaPredicted RBP12.12□□□□□ -0.47
HDAC4-216ENST00000544989 CTSOP43234 321 aaPredicted RBP12.12□□□□□ -0.47
HDAC4-216ENST00000544989 MAPKAPK2P49137 400 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 ATXN3P54252 364 aaPredicted RBP12.12□□□□□ -0.47
HDAC4-216ENST00000544989 GEMIN4P57678 1058 aaKnown RBP12.12□□□□□ -0.47
HDAC4-216ENST00000544989 ZBED6P86452 979 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 CCDC15Q0P6D6 951 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 CST6Q15828 149 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 C15orf59Q2T9L4 293 aaPredicted RBP12.12□□□□□ -0.47
HDAC4-216ENST00000544989 EFHC2Q5JST6 749 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 RETSATQ6NUM9 610 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 SLFN11Q7Z7L1 901 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 SLC41A1Q8IVJ1 513 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 ZNF366Q8N895 744 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 JOSD2Q8TAC2 188 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 GANCQ8TET4 914 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 DNASE2BQ8WZ79 361 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 OR8D1Q8WZ84 308 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 ALG14Q96F25 216 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 RPL10LQ96L21 214 aaKnown RBP12.12□□□□□ -0.47
HDAC4-216ENST00000544989 MCEEQ96PE7 176 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 EIF3CQ99613 913 aaKnown RBP12.12□□□□□ -0.47
HDAC4-216ENST00000544989 SLCO3A1Q9UIG8 710 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 FZD4Q9ULV1 537 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 HS3ST2Q9Y278 367 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.12□□□□□ -0.47
HDAC4-216ENST00000544989 OR51B4Q9Y5P0 310 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 SCINQ9Y6U3 715 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 SPEGQ15772 3267 aa12.12□□□□□ -0.47
HDAC4-216ENST00000544989 A0A1B0GTW7 788 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 TCRBV5S1A1TA0A578 114 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 LRRC72A6NJI9 287 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 C1QTNF3-AMACRE9PGA6 284 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 GDF9O60383 454 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 RTN2O75298 545 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 CNTN5O94779 1100 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 SEMA4FO95754 770 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 CFIP05156 583 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 PLEKP08567 350 aaPredicted RBP12.11□□□□□ -0.47
HDAC4-216ENST00000544989 RHOQP17081 205 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 C5AR1P21730 350 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 GGCXP38435 758 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 PBX1P40424 430 aa12.11□□□□□ -0.47
HDAC4-216ENST00000544989 HDAC4P56524 1084 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms