RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 CAMK1Q14012 370 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 ERV3-1Q14264 604 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 NAA25Q14CX7 972 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 TBCEQ15813 527 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-207ENST00000544052 AP5B1Q2VPB7 878 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 AARS2Q5JTZ9 985 aaKnown RBP4.06□□□□□ -1.76
SCFD1-207ENST00000544052 ITPRIPL1Q6GPH6 555 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 C16orf54Q6UWD8 224 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 NEK10Q6ZWH5 1172 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 SCN4BQ8IWT1 228 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 C2CD4CQ8TF44 421 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 EYA3Q99504 573 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 CENPOQ9BU64 300 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.06□□□□□ -1.76
SCFD1-207ENST00000544052 LMAN2LQ9H0V9 348 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 PCDHB16Q9NRJ7 776 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 SLC22A11Q9NSA0 550 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 KRT84Q9NSB2 600 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 ALKBH4Q9NXW9 302 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 SLC45A1Q9Y2W3 748 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 AGLP35573 1532 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 GPATCH8Q9UKJ3 1502 aaKnown RBP4.06□□□□□ -1.76
SCFD1-207ENST00000544052 DOK2O60496 412 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 GUCY1B2O75343 617 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 CNTN5O94779 1100 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 SLC3A2P08195 630 aaKnown RBP4.06□□□□□ -1.76
SCFD1-207ENST00000544052 HOXD12P35452 270 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 HNF1BP35680 557 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 HARS2P49590 506 aaKnown RBP4.06□□□□□ -1.76
SCFD1-207ENST00000544052 IRX6P78412 446 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-207ENST00000544052 BLOC1S1P78537 153 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 SLC14A1Q13336 389 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 KCTD2Q14681 263 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 CNGA3Q16281 694 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 FAM205BPQ63HN1 556 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 B4GALNT4Q76KP1 1039 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 MON1AQ86VX9 555 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 AFAP1Q8N556 730 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 ADAMTS15Q8TE58 950 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 INTS2Q9H0H0 1204 aaKnown RBP4.06□□□□□ -1.76
SCFD1-207ENST00000544052 SYNPO2LQ9H987 977 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 SEMA4BQ9NPR2 832 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-207ENST00000544052 FOXJ2Q9P0K8 574 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 SLC25A10Q9UBX3 287 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-207ENST00000544052 SLC25A13Q9UJS0 675 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 SUFUQ9UMX1 484 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 RPS6KL1Q9Y6S9 549 aa4.06□□□□□ -1.76
SCFD1-207ENST00000544052 ZNF142P52746 1687 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-207ENST00000544052 TCRBV5S1A1TA0A578 114 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 PI4KAP2A4QPH2 592 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 DSCR3O14972 297 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 SYN3O14994 580 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 METTL18O95568 372 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 RFPL3SP0C7P2 107 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 CYP4B1P13584 511 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 ZNF84P51523 738 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 CDH15P55291 814 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 BYSLQ13895 437 aaKnown RBP4.05□□□□□ -1.76
SCFD1-207ENST00000544052 KCNB1Q14721 858 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 SEC23BQ15437 767 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 GPR162Q16538 588 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 GXYLT1Q4G148 440 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 TMEM88Q6PEY1 159 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 ATF7IPQ6VMQ6 1270 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 DCDC5Q6ZRR9 648 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 FASTKD5Q7L8L6 764 aaKnown RBP4.05□□□□□ -1.76
SCFD1-207ENST00000544052 SLC29A4Q7RTT9 530 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 TMEM200AQ86VY9 491 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 CNTROBQ8N137 903 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 ENDOVQ8N8Q3 282 aaKnown RBP4.05□□□□□ -1.76
SCFD1-207ENST00000544052 EXD3Q8N9H8 876 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 RFWD2Q8NHY2 731 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 PDLIM2Q96JY6 352 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 COQ10AQ96MF6 247 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 SFXN1Q9H9B4 322 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 VEZTQ9HBM0 779 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 IL17RBQ9NRM6 502 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.05□□□□□ -1.76
SCFD1-207ENST00000544052 TFCP2L1Q9NZI6 479 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 MYRFQ9Y2G1 1151 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 PIAS3Q9Y6X2 628 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 CLIP1P30622 1438 aa4.05□□□□□ -1.76
SCFD1-207ENST00000544052 MYO3AQ8NEV4 1616 aa4.04□□□□□ -1.76
SCFD1-207ENST00000544052 CCDC151A5D8V7 595 aa4.04□□□□□ -1.76
SCFD1-207ENST00000544052 TTC34A8MYJ7 566 aa4.04□□□□□ -1.76
SCFD1-207ENST00000544052 F5H0A9 414 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-207ENST00000544052 TGFB1I1O43294 461 aa4.04□□□□□ -1.76
SCFD1-207ENST00000544052 NARSO43776 548 aaKnown RBP4.04□□□□□ -1.76
SCFD1-207ENST00000544052 ZBED4O75132 1171 aa4.04□□□□□ -1.76
SCFD1-207ENST00000544052 TMEM63AO94886 807 aa4.04□□□□□ -1.76
SCFD1-207ENST00000544052 ZNF202O95125 648 aa4.04□□□□□ -1.76
SCFD1-207ENST00000544052 URODP06132 367 aa4.04□□□□□ -1.76
SCFD1-207ENST00000544052 ADH4P08319 380 aa4.04□□□□□ -1.76
SCFD1-207ENST00000544052 UBL4AP11441 157 aa4.04□□□□□ -1.76
SCFD1-207ENST00000544052 TNNT1P13805 278 aa4.04□□□□□ -1.76
SCFD1-207ENST00000544052 INSRRP14616 1297 aa4.04□□□□□ -1.76
SCFD1-207ENST00000544052 EPHA8P29322 1005 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-207ENST00000544052 SIM1P81133 766 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-207ENST00000544052 DCTN2Q13561 401 aaKnown RBP4.04□□□□□ -1.76
SCFD1-207ENST00000544052 PDE1CQ14123 709 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms