RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 APOEP02649 317 aa20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 MAT2AP31153 395 aaKnown RBP20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 NUCB2P80303 420 aa20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 LRRC63Q05C16 580 aa20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 ZNF211Q13398 564 aaPredicted RBP20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 PNOCQ13519 176 aa20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 EIF4EBP2Q13542 120 aaPredicted RBP20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 FAM46CQ5VWP2 391 aa20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 DSG4Q86SJ6 1040 aa20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 ERICH1Q86X53 443 aa20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 SLC25A45Q8N413 288 aa20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 LMO3Q8TAP4 145 aa20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 COL26A1Q96A83 441 aa20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 PRMT1Q99873 361 aaKnown RBP20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 TRIM62Q9BVG3 475 aa20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 SCAND2PQ9GZW5 306 aaPredicted RBP20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 ST7Q9NRC1 585 aa20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 PPM1HQ9ULR3 514 aa20.57■□□□□ 0.88
LPCAT3-211ENST00000543794 PRAMEF26H0Y7S4 382 aa20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 CAPN9O14815 690 aa20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 SDC3O75056 442 aa20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 MT-CO3P00414 261 aa20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 IGLV3-25P01717 112 aa20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 PLA2G2AP14555 144 aa20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 PDGFRAP16234 1089 aa20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 ACADSBP45954 432 aa20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 AGBL4Q5VU57 503 aa20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 ZNF605Q86T29 641 aa20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 SPACA3Q8IXA5 215 aa20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 CCAR2Q8N163 923 aaKnown RBP20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 STK32AQ8WU08 396 aa20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 OR8D1Q8WZ84 308 aa20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.56■□□□□ 0.88
LPCAT3-211ENST00000543794 TP53BP1Q12888 1972 aaPredicted RBP20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 MGAQ8IWI9 3026 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 TRIM49BA6NDI0 452 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 KCNU1A8MYU2 1149 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 F5H5T6 163 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 ATP9BO43861 1147 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 TRUB2O95900 331 aaKnown RBP20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 NUMBP49757 651 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 OXCT1P55809 520 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 CCDC173Q0VFZ6 552 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 CNTN1Q12860 1018 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 SETMARQ53H47 684 aaPredicted RBP20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 CXorf57Q6NSI4 855 aaKnown RBP20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 PCSK4Q6UW60 755 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 RRAGAQ7L523 313 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 ALG14Q96F25 216 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 KLHDC7BQ96G42 594 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 GSDMAQ96QA5 445 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 SLC4A5Q9BY07 1137 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 SLC12A6Q9UHW9 1150 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 MYLKQ15746 1914 aa20.55■□□□□ 0.88
LPCAT3-211ENST00000543794 MCF2LO15068 1137 aa20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 RNGTTO60942 597 aaKnown RBP20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 YWHAZP63104 245 aaKnown RBP20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 GCNT1Q02742 428 aa20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 TTC39BQ5VTQ0 682 aaPredicted RBP20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 TMEM110Q86TL2 294 aa20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 ATP6V0D2Q8N8Y2 350 aa20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 TMEM145Q8NBT3 493 aa20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 ERCC4Q92889 916 aaPredicted RBP20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 PPP1R9BQ96SB3 815 aa20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 POPDC2Q9HBU9 364 aa20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 KLHL11Q9NVR0 708 aa20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 CNTN6Q9UQ52 1028 aa20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 CA5BQ9Y2D0 317 aa20.54■□□□□ 0.88
LPCAT3-211ENST00000543794 A0A1B0GVM2 712 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 TCAF2A6NFQ2 919 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 ALOX15BO15296 676 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 P4HA2O15460 535 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 DGKAP23743 735 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 CXADRP78310 365 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 CETN1Q12798 172 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 ACCSLQ4AC99 568 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 DENND1BQ6P3S1 775 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 KDM7AQ6ZMT4 941 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 CIR1Q86X95 450 aaPredicted RBP20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 OR4C6Q8NH72 309 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 SPATA20Q8TB22 786 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 MED15Q96RN5 788 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 THAP9Q9H5L6 903 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 PREBQ9HCU5 417 aa20.53■□□□□ 0.88
LPCAT3-211ENST00000543794 CFAP46Q8IYW2 2715 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 C1QTNF3-AMACRE9PGA6 284 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 TAS2R38P59533 333 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 PITX1P78337 314 aaPredicted RBP20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 DAB2P98082 770 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 CFHR1Q03591 330 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 KCNH2Q12809 1159 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 DLG2Q15700 870 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 MEA1Q16626 185 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 RABGAP1LQ5R372 815 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 CDCP2Q5VXM1 449 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 FBXL22Q6P050 247 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 ARHGEF19Q8IW93 802 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 EHBP1Q8NDI1 1231 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 ZNF248Q8NDW4 579 aa20.52■□□□□ 0.88
LPCAT3-211ENST00000543794 CEP63Q96MT8 703 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms