RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 RWDD2BP57060 319 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 YBEYP58557 167 aaPredicted RBP6.47□□□□□ -1.37
LTBR-212ENST00000543542 DYNLT1P63172 113 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 MTAPQ13126 283 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 SEMA3BQ13214 749 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 DPYSL3Q14195 570 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 ZNF234Q14588 700 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 ANKRD20A8PQ5CZ79 823 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 MANEALQ5VSG8 457 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 LRRC38Q5VT99 294 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 CXorf57Q6NSI4 855 aaKnown RBP6.47□□□□□ -1.37
LTBR-212ENST00000543542 RETSATQ6NUM9 610 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 CYP4V2Q6ZWL3 525 aaPredicted RBP6.47□□□□□ -1.37
LTBR-212ENST00000543542 ADIPOR2Q86V24 386 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 NLRP14Q86W24 1093 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 RCOR2Q8IZ40 523 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 RYBPQ8N488 228 aaPredicted RBP6.47□□□□□ -1.37
LTBR-212ENST00000543542 SPEM1Q8N4L4 309 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 LZTR1Q8N653 840 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.47□□□□□ -1.37
LTBR-212ENST00000543542 TMEM105Q8N8V8 129 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 ATP11CQ8NB49 1132 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 DTWD2Q8NBA8 298 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 OR7D4Q8NG98 312 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 KCNV2Q8TDN2 545 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 USP33Q8TEY7 942 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 NSMCE1Q8WV22 266 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 RAPGEF5Q92565 580 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 CLDN23Q96B33 292 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 P2RY11Q96G91 374 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 RBM41Q96IZ5 413 aaKnown RBP6.47□□□□□ -1.37
LTBR-212ENST00000543542 RPL10LQ96L21 214 aaKnown RBP6.47□□□□□ -1.37
LTBR-212ENST00000543542 CSPG4P5Q96PW8 444 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 ZNF670Q9BS34 389 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 FEM1AQ9BSK4 669 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 IER2Q9BTL4 223 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 LRFN3Q9BTN0 628 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 MAGEH1Q9H213 219 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 CHRDQ9H2X0 955 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 SP110Q9HB58 689 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 NDFIP2Q9NV92 336 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 CACNA2D2Q9NY47 1150 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 RCOR3Q9P2K3 495 aaPredicted RBP6.47□□□□□ -1.37
LTBR-212ENST00000543542 SUN2Q9UH99 717 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 PACSIN2Q9UNF0 486 aaPredicted RBP6.47□□□□□ -1.37
LTBR-212ENST00000543542 ERVW-1Q9UQF0 538 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 TBC1D30Q9Y2I9 924 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.47□□□□□ -1.37
LTBR-212ENST00000543542 CAPN6Q9Y6Q1 641 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 STON1Q9Y6Q2 735 aa6.47□□□□□ -1.37
LTBR-212ENST00000543542 A0A0D9SEW6 157 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 GOLGA6L9A6NEM1 432 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 ANTXRLA6NF34 631 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 WASH4PA8MWX3 477 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 MIF4GDA9UHW6 222 aaKnown RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 WASH3PC4AMC7 463 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 SGK1O00141 431 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 APOL1O14791 398 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 KIF5CO60282 957 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 SNAP91O60641 907 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 RNASEH1O60930 286 aaKnown RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 HLA-EP13747 358 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 HNRNPLP14866 589 aaKnown RBP eCLIP6.46□□□□□ -1.38
LTBR-212ENST00000543542 ZFXP17010 805 aaPredicted RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 GLDCP23378 1020 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 CTNNA2P26232 953 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 HOXC13P31276 330 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 CTNNA1P35221 906 aaKnown RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 IL12RB1P42701 662 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 CTSOP43234 321 aaPredicted RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 KIR2DL1P43626 348 aaPredicted RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 RECQLP46063 649 aaPredicted RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 STK19P49842 368 aaPredicted RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 PAPOLAP51003 745 aaKnown RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 NDST2P52849 883 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 PLK1P53350 603 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 GEMIN4P57678 1058 aaKnown RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 CSTF1Q05048 431 aaKnown RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 DPYSQ14117 519 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 TFDP2Q14188 446 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 LLGL1Q15334 1064 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 RPS6KA1Q15418 735 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 PARP15Q460N3 678 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 HSF5Q4G112 596 aaPredicted RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 TFDP3Q5H9I0 405 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 ZNF569Q5MCW4 686 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 SEL1L2Q5TEA6 688 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 TMEM215Q68D42 235 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 PKN3Q6P5Z2 889 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 MFSD7Q6UXD7 560 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 LINGO4Q6UY18 593 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 LEKR1Q6ZMV7 388 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 SPOCD1Q6ZMY3 1216 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 KIAA0907Q7Z7F0 614 aaPredicted RBP6.46□□□□□ -1.38
LTBR-212ENST00000543542 NT5DC3Q86UY8 548 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 C1orf210Q8IVY1 113 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 KATNAL2Q8IYT4 538 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 ATPAF2Q8N5M1 289 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 PAF1Q8N7H5 531 aa6.46□□□□□ -1.38
LTBR-212ENST00000543542 ZNF366Q8N895 744 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms