RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ADAM23O75077 832 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 PAPSS2O95340 614 aaPredicted RBP17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 CD48P09326 243 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 IL4RP24394 825 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 ETFBP38117 255 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 ECT2LQ008S8 904 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 DPYSL3Q14195 570 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 SDE2Q6IQ49 451 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 MAP7D3Q8IWC1 876 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 UMODL1-AS1Q8N2C9 162 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 RNF10Q8N5U6 811 aaKnown RBP17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 LRRC57Q8N9N7 239 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 DCAF4L2Q8NA75 395 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 OR7D4Q8NG98 312 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 KIAA1524Q8TCG1 905 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 ZNF830Q96NB3 372 aaPredicted RBP17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 PSMB7Q99436 277 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 GABRG3Q99928 467 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 MAGEH1Q9H213 219 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 C2orf42Q9NWW7 574 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 CACNA2D2Q9NY47 1150 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 DDX56Q9NY93 547 aaKnown RBP17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 ERVW-1Q9UQF0 538 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 STON1Q9Y6Q2 735 aa17.54■□□□□ 0.4
RABGGTA-203ENST00000543002 GRID2IPA4D2P6 1211 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 PSTPIP1O43586 416 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 SRPRAP08240 638 aaKnown RBP17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 AMPD1P23109 780 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 KDELR1P24390 212 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 IL12RB1P42701 662 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 WASP42768 502 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 CTSOP43234 321 aaPredicted RBP17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 YBEYP58557 167 aaPredicted RBP17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 SATB1Q01826 763 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 ZFYVE27Q5T4F4 411 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 KDM1BQ8NB78 822 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 RAPGEF5Q92565 580 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 ARHGEF2Q92974 986 aaKnown RBP17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 MRGPRX3Q96LB0 322 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 ZNF670Q9BS34 389 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 SPON2Q9BUD6 331 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 C2orf49Q9BVC5 232 aaPredicted RBP17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 CALN1Q9BXU9 219 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 TMEM245Q9H330 911 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 NOL6Q9H6R4 1146 aaKnown RBP17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 PRMT8Q9NR22 394 aaPredicted RBP17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 KLHL11Q9NVR0 708 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 SLC8A2Q9UPR5 921 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 PPP2R2CQ9Y2T4 447 aa17.53■□□□□ 0.4
RABGGTA-203ENST00000543002 WASH3PC4AMC7 463 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 DCLK1O15075 740 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 TNNT1P13805 278 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 HOXB2P14652 356 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 ACVRL1P37023 503 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 NUMBP49757 651 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 VASPP50552 380 aaPredicted RBP17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 NDST2P52849 883 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 ST8SIA6P61647 398 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 MMRN1Q13201 1228 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 POLD3Q15054 466 aaPredicted RBP17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 CRY1Q16526 586 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 FNDC3BQ53EP0 1204 aaKnown RBP17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 SERPINA13PQ6UXR4 307 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 MAML2Q8IZL2 1156 aaPredicted RBP17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 SYCE1Q8N0S2 351 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 MYO19Q96H55 970 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 ACE2Q9BYF1 805 aaPredicted RBP17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 KLC2Q9H0B6 622 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 ATP13A1Q9HD20 1204 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 POLR3BQ9NW08 1133 aaPredicted RBP17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 VPS51Q9UID3 782 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 GUCA1BQ9UMX6 200 aa17.52■□□□□ 0.4
RABGGTA-203ENST00000543002 CACNA1IQ9P0X4 2223 aa17.52■□□□□ 0.39
RABGGTA-203ENST00000543002 LRRD1A4D1F6 860 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 ZNF487B1APH4 448 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 RASA4BC9J798 803 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 RASA4O43374 803 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 SNAP91O60641 907 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 PALMO75781 387 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 ZMPSTE24O75844 475 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 KRT1P04264 644 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 PRKCHP24723 683 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 DGKEP52429 567 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 PARP15Q460N3 678 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 ANKRD20A8PQ5CZ79 823 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 IL31Q6EBC2 164 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 TMEM92Q6UXU6 159 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 VSIG1Q86XK7 387 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 LZTR1Q8N653 840 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 FAF2Q96CS3 445 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 RPL10LQ96L21 214 aaKnown RBP17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 PRRX2Q99811 253 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 LRRC19Q9H756 370 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 ETNK2Q9NVF9 386 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 SLC25A13Q9UJS0 675 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 FBXO4Q9UKT5 387 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 CAPN6Q9Y6Q1 641 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 CHD5Q8TDI0 1954 aa17.51■□□□□ 0.39
RABGGTA-203ENST00000543002 MUC22E2RYF6 1773 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms