RNA–Protein interactions for RNA: ENST00000542973.5

KDM2B-215, Transcript of lysine demethylase 2B, human

TSL 2 BASIC

Gene KDM2B, Length 3,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM2B-215	ENST00000542973	PPEF2	O14830	753 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	ADORA2B	P29275	332 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	CYTH1	Q15438	398 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	PIGG	Q5H8A4	983 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	GRTP1	Q5TC63	336 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	SLC35F5	Q8WV83	523 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	KBTBD7	Q8WVZ9	684 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	NDRG1	Q92597	394 aa	Known RBP	13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	COPS5	Q92905	334 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	TMA16	Q96EY4	203 aa	Known RBP	13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	VRTN	Q9H8Y1	702 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	HOXC10	Q9NYD6	342 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973		A0A087WZ62	844 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973		H3BSA7	217 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	JUN	P05412	331 aa	Known RBP	13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	C2	P06681	752 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	FAM58BP	P0C7Q3	252 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	ARSA	P15289	507 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	SPR	P35270	261 aa	Predicted RBP	13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	ARL4A	P40617	200 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	GLRB	P48167	497 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	RBP5	P82980	135 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	NRF1	Q16656	503 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	IL31	Q6EBC2	164 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	GADL1	Q6ZQY3	521 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	ZNF567	Q8N184	647 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	CEP70	Q8NHQ1	597 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	KLHL32	Q96NJ5	620 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	DPEP3	Q9H4B8	488 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	NMRAL1	Q9HBL8	299 aa		13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	PRPF19	Q9UMS4	504 aa	Known RBP	13.72	□□□□□ -0.21
KDM2B-215	ENST00000542973	PFDN1	O60925	122 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	HPCA	P84074	193 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	PKDCC	Q504Y2	493 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	PID1	Q7Z2X4	250 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	SNX31	Q8N9S9	440 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	SEMA6A	Q9H2E6	1030 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	PDZD7	Q9H5P4	517 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	WDR41	Q9HAD4	459 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	KPNA7	A9QM74	516 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	PIGN	O95427	931 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	LIMK2	P53671	638 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	IFRD2	Q12894	506 aa	Predicted RBP	13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	NAB1	Q13506	487 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	TMEM259	Q4ZIN3	620 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	METTL21C	Q5VZV1	264 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	SEL1L3	Q68CR1	1132 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	AHI1	Q8N157	1196 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	URGCP	Q8TCY9	931 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	MFSD3	Q96ES6	412 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	KIF12	Q96FN5	646 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	ZFR	Q96KR1	1074 aa	Known RBP	13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	NPAS2	Q99743	824 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	APOL2	Q9BQE5	337 aa		13.71	□□□□□ -0.21
KDM2B-215	ENST00000542973	MATN2	O00339	956 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	GAS2	O43903	313 aa	Known RBP	13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	CCDC130	P13994	396 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	PTPN1	P18031	435 aa	Known RBP	13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	ART3	Q13508	389 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	ARL13A	Q5H913	290 aa	Predicted RBP	13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	TICAM1	Q8IUC6	712 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	DNAAF3	Q8N9W5	541 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	C12orf42	Q96LP6	360 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	PRDM12	Q9H4Q4	367 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	ASB7	Q9H672	318 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	TASP1	Q9H6P5	420 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	ZNF696	Q9H7X3	374 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	ZNF408	Q9H9D4	720 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	KIAA1257	Q9ULG3	409 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	DMTF1	Q9Y222	760 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	USP3	Q9Y6I4	520 aa		13.71	□□□□□ -0.22
KDM2B-215	ENST00000542973	TMEM114	B3SHH9	223 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	STRN	O43815	780 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	ARF4	P18085	180 aa	Predicted RBP	13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	HMGB2	P26583	209 aa	Known RBP	13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	SLC5A2	P31639	672 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	PTPN9	P43378	593 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	GRIA4	P48058	902 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	NUMB	P49757	651 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	PITX1	P78337	314 aa	Predicted RBP	13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	TMEM62	Q0P6H9	643 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	ADCY4	Q8NFM4	1077 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	OR6B3	Q8NGW1	331 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	RP9	Q8TA86	221 aa	Known RBP	13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	SREK1	Q8WXA9	508 aa	Known RBP	13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	SPATA33	Q96N06	139 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	NAT9	Q9BTE0	207 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	LIN28A	Q9H9Z2	209 aa	Known RBP	13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	ZDHHC2	Q9UIJ5	367 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	SLC39A10	Q9ULF5	831 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	FIS1	Q9Y3D6	152 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	HDAC3	O15379	428 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	RNASEH2A	O75792	299 aa	Known RBP	13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	CSPG5	O95196	566 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	PDGFRB	P09619	1106 aa		13.7	□□□□□ -0.22
KDM2B-215	ENST00000542973	CDK4	P11802	303 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms