RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 JMJD7P0C870 316 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 LIPCP11150 499 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 RALAP11233 206 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 CCDC130P13994 396 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 GOT1P17174 413 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 TNNI1P19237 187 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 WT1P19544 449 aaPredicted RBP4.96□□□□□ -1.62
LIMS1-214ENST00000542845 GNLYP22749 145 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 ADORA2BP29275 332 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 HLA-FP30511 346 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 UGT1A5P35504 534 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 DCTP40126 519 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 UQCRFS1P47985 274 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 MAPK10P53779 464 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 COG7P83436 770 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 ORC2Q13416 577 aaPredicted RBP4.96□□□□□ -1.62
LIMS1-214ENST00000542845 MORC3Q14149 939 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 SPIDRQ14159 915 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 DUOXA2Q1HG44 320 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 DEFB133Q30KQ1 61 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 MPPE1Q53F39 396 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 PERM1Q5SV97 790 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 SCARA5Q6ZMJ2 495 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 PAQR9Q6ZVX9 377 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 RSRC2Q7L4I2 434 aaKnown RBP4.96□□□□□ -1.62
LIMS1-214ENST00000542845 RAB11FIP2Q7L804 512 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 DYMQ7RTS9 669 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 GPRIN1Q7Z2K8 1008 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 DSG4Q86SJ6 1040 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 ADIPOR2Q86V24 386 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 TREML1Q86YW5 311 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 ZC3H3Q8IXZ2 948 aaKnown RBP4.96□□□□□ -1.62
LIMS1-214ENST00000542845 AADATQ8N5Z0 425 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 RBBP8NLQ8NC74 664 aaPredicted RBP4.96□□□□□ -1.62
LIMS1-214ENST00000542845 SSC4DQ8WTU2 575 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 TMA16Q96EY4 203 aaKnown RBP4.96□□□□□ -1.62
LIMS1-214ENST00000542845 SMARCD1Q96GM5 515 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 C8orf76Q96K31 380 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 PPP1R13BQ96KQ4 1090 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 ACCSQ96QU6 501 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 FUCA2Q9BTY2 467 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 SLC2A11Q9BYW1 496 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 FOXP3Q9BZS1 431 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 MRPL44Q9H9J2 332 aaKnown RBP4.96□□□□□ -1.62
LIMS1-214ENST00000542845 FZD3Q9NPG1 666 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 FAM49BQ9NUQ9 324 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 INTS13Q9NVM9 706 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.96□□□□□ -1.62
LIMS1-214ENST00000542845 COMMD8Q9NX08 183 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 NLGN3Q9NZ94 848 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 IL37Q9NZH6 218 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 KCND2Q9NZV8 630 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 PISDQ9UG56 409 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 VPS4AQ9UN37 437 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 EXOC7Q9UPT5 735 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 CEP83Q9Y592 693 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 STYXL1Q9Y6J8 313 aa4.96□□□□□ -1.62
LIMS1-214ENST00000542845 ABCA12Q86UK0 2595 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 COL27A1Q8IZC6 1860 aaPredicted RBP4.95□□□□□ -1.62
LIMS1-214ENST00000542845 A0A087X0B3 334 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 LY6G6EA0A0G2JKS1 128 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 PRAMEF26H0Y7S4 382 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 SCAMP1O15126 338 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 PHACTR2O75167 634 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 SEMA7AO75326 666 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 TACC1O75410 805 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 REC8O95072 547 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 GCNT3O95395 438 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 GIMD1P0DJR0 217 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 DLATP10515 647 aaKnown RBP4.95□□□□□ -1.62
LIMS1-214ENST00000542845 PABPC1P11940 636 aaKnown RBP4.95□□□□□ -1.62
LIMS1-214ENST00000542845 PRLRP16471 622 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 ITIH1P19827 911 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 SCP2P22307 547 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 GNA15P30679 374 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 CD70P32970 193 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 ABCD1P33897 745 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 ADPRHP54922 357 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 CLDN2P57739 230 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 MYL6P60660 151 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 POU5F1Q01860 360 aaKnown RBP4.95□□□□□ -1.62
LIMS1-214ENST00000542845 CENPCQ03188 943 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 TRPC3Q13507 836 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 ME3Q16798 604 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 OR6B2Q6IFH4 312 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 LIAT1Q6ZQX7 453 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 ZNF720Q7Z2F6 126 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 TRAPPC11Q7Z392 1133 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 LIMS2Q7Z4I7 341 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 IQCHQ86VS3 1027 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 SFR1Q86XK3 245 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 AHI1Q8N157 1196 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 STK40Q8N2I9 435 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 ZMIZ2Q8NF64 920 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 OR13H1Q8NG92 308 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 C9orf43Q8TAL5 461 aaPredicted RBP4.95□□□□□ -1.62
LIMS1-214ENST00000542845 SLC2A14Q8TDB8 520 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 WFIKKN2Q8TEU8 576 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 ZDHHC1Q8WTX9 485 aa4.95□□□□□ -1.62
LIMS1-214ENST00000542845 MIB2Q96AX9 1013 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms