RNA–Protein interactions for RNA: ENST00000542687.1

MRPL40P1-201, Transcript of mitochondrial ribosomal protein L40 pseudogene 1, humanhuman

BASIC

Gene MRPL40P1, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40P1-201ENST00000542687 ZNF33AQ06730 810 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 PPIDQ08752 370 aaKnown RBP8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 RUNX3Q13761 415 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 DHX34Q14147 1143 aaKnown RBP8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 GRM2Q14416 872 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 PPP1R7Q15435 360 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 OASLQ15646 514 aaKnown RBP8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 GLE1Q53GS7 698 aaKnown RBP8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 SLC45A4Q5BKX6 768 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 HEATR6Q6AI08 1181 aaKnown RBP8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 TIGD7Q6NT04 549 aaPredicted RBP8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 C8orf74Q6P047 294 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 TTC27Q6P3X3 843 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 B4GALNT4Q76KP1 1039 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 ARHGAP12Q8IWW6 846 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 TP53INP2Q8IXH6 220 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 CCDC13Q8IYE1 715 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 NAT16Q8N8M0 369 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 CCDC89Q8N998 374 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 FAM71DQ8N9W8 422 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 NOA1Q8NC60 698 aaKnown RBP8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 CSGALNACT1Q8TDX6 532 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 NSMCE1Q8WV22 266 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 HTR3CQ8WXA8 447 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 UBXN4Q92575 508 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 HDAC11Q96DB2 347 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 HMCESQ96FZ2 354 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 TSGA13Q96PP4 275 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 QKIQ96PU8 341 aaKnown RBP eCLIP8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 TMEM121Q9BTD3 319 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 RPP25Q9BUL9 199 aaKnown RBP8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 SLC2A11Q9BYW1 496 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 NOL6Q9H6R4 1146 aaKnown RBP8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 C10orf88Q9H8K7 445 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 BRD9Q9H8M2 597 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 ECT2Q9H8V3 914 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 SEPT10Q9P0V9 454 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 AMACRQ9UHK6 382 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 IPO11Q9UI26 975 aaKnown RBP8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 MYO7AQ13402 2215 aa8.22□□□□□ -1.09
MRPL40P1-201ENST00000542687 MYH10P35580 1976 aa8.21□□□□□ -1.09
MRPL40P1-201ENST00000542687 A0A0D9SEW6 157 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 FAM187AA6NFU0 413 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 CBX4O00257 560 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 KCNN4O15554 427 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 HOXC11O43248 304 aaPredicted RBP8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 KDELR3O43731 214 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 NEBLO76041 1014 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 IFNB1P01574 187 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 MZF1P28698 734 aaPredicted RBP8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 RBL1P28749 1068 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 ACVRL1P37023 503 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 CSKP41240 450 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 TFF2Q03403 129 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 TNK2Q07912 1038 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 IL10RBQ08334 325 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 LMAN2Q12907 356 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 SERINC3Q13530 473 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 SLC12A1Q13621 1099 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 DMC1Q14565 340 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 PRKD1Q15139 912 aaPredicted RBP8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 AAK1Q2M2I8 961 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 ITPRIPL2Q3MIP1 535 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 FSCBQ5H9T9 825 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 TEX35Q5T0J7 233 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 RNF43Q68DV7 783 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 CXorf57Q6NSI4 855 aaKnown RBP8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 SYDE1Q6ZW31 735 aaPredicted RBP8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 ALLCQ8N6M5 410 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 LRRN4CLQ8ND94 238 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 OR7D4Q8NG98 312 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 CCHCR1Q8TD31 782 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 LRRN4Q8WUT4 740 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 SLCO2A1Q92959 643 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 ARHGEF2Q92974 986 aaKnown RBP8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 ASIC4Q96FT7 647 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 P2RY11Q96G91 374 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 FEM1AQ9BSK4 669 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 LRRC1Q9BTT6 524 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 KCNK12Q9HB15 430 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 SP110Q9HB58 689 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 USP29Q9HBJ7 922 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 ATP13A1Q9HD20 1204 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 HPS4Q9NQG7 708 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 IGSF9Q9P2J2 1179 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 THEGQ9P2T0 379 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 DEC1Q9P2X7 70 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 VPS28Q9UK41 221 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 CLEC4EQ9ULY5 219 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 UTP11Q9Y3A2 253 aaKnown RBP8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 TTC28Q96AY4 2481 aa8.21□□□□□ -1.1
MRPL40P1-201ENST00000542687 PRRC2BQ5JSZ5 2229 aaKnown RBP8.2□□□□□ -1.1
MRPL40P1-201ENST00000542687 C5orf60A6NFR6 353 aa8.2□□□□□ -1.1
MRPL40P1-201ENST00000542687 ZSCAN5CA6NGD5 496 aaPredicted RBP8.2□□□□□ -1.1
MRPL40P1-201ENST00000542687 J3KR12 359 aa8.2□□□□□ -1.1
MRPL40P1-201ENST00000542687 KCNK1O00180 336 aa8.2□□□□□ -1.1
MRPL40P1-201ENST00000542687 MATN3O15232 486 aa8.2□□□□□ -1.1
MRPL40P1-201ENST00000542687 TTI1O43156 1089 aa8.2□□□□□ -1.1
MRPL40P1-201ENST00000542687 RAD51CO43502 376 aa8.2□□□□□ -1.1
MRPL40P1-201ENST00000542687 CACNG3O60359 315 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms