RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 MCMBPQ9BTE3 642 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 MLPHQ9BV36 600 aaPredicted RBP6.69□□□□□ -1.34
PTPRO-208ENST00000542557 IL22Q9GZX6 179 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 OSBPL2Q9H1P3 480 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 CXorf56Q9H5V9 222 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 WDCPQ9H6R7 721 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 ZNF395Q9H8N7 513 aaPredicted RBP6.69□□□□□ -1.34
PTPRO-208ENST00000542557 PIH1D1Q9NWS0 290 aaKnown RBP6.69□□□□□ -1.34
PTPRO-208ENST00000542557 DNAJC28Q9NX36 388 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 NSMCE4AQ9NXX6 385 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 ARMCX1Q9P291 453 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 STOML1Q9UBI4 398 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 CARNS1A5YM72 827 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 ARL5CA6NH57 179 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 SPECC1L-ADORA2AF8WAN1 911 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 LIN7AO14910 233 aaPredicted RBP6.69□□□□□ -1.34
PTPRO-208ENST00000542557 ZNF623O75123 536 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 AMHP03971 560 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 RPSAP08865 295 aaKnown RBP6.69□□□□□ -1.34
PTPRO-208ENST00000542557 ERVK-10P10266 1014 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 IBSPP21815 317 aaPredicted RBP6.69□□□□□ -1.34
PTPRO-208ENST00000542557 HADHAP40939 763 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 HARS2P49590 506 aaKnown RBP6.69□□□□□ -1.34
PTPRO-208ENST00000542557 RAB27AP51159 221 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 CLNS1AP54105 237 aaKnown RBP6.69□□□□□ -1.34
PTPRO-208ENST00000542557 ZBTB17Q13105 803 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 TAF1CQ15572 869 aaPredicted RBP6.69□□□□□ -1.34
PTPRO-208ENST00000542557 C16orf46Q6P387 395 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 TAC4Q86UU9 113 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 SERINC5Q86VE9 423 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 LCA5Q86VQ0 697 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 DCLK2Q8N568 766 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 PPP4R1Q8TF05 950 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 RTP3Q9BQQ7 232 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 TKTL2Q9H0I9 626 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 DMAP1Q9NPF5 467 aaPredicted RBP6.69□□□□□ -1.34
PTPRO-208ENST00000542557 MIOSQ9NXC5 875 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 MARCOQ9UEW3 520 aaPredicted RBP6.69□□□□□ -1.34
PTPRO-208ENST00000542557 DSEQ9UL01 958 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 SOX13Q9UN79 622 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 PLA2G4CQ9UP65 541 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 DNAJC16Q9Y2G8 782 aa6.69□□□□□ -1.34
PTPRO-208ENST00000542557 PTPRDP23468 1912 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 MANSC4A6NHS7 340 aaPredicted RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 B2RBV5 119 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 GPR182O15218 404 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 H2AFYO75367 372 aaKnown RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 LRIG2O94898 1065 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 KLHL2O95198 593 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 ENO1P06733 434 aaKnown RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 KITP10721 976 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 NFKB1P19838 968 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 HOXC13P31276 330 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 PGM1P36871 562 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 PTDSS1P48651 473 aaKnown RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 CSRP3P50461 194 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 SCNN1GP51170 649 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 NKX3-2P78367 333 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 EIF4EBP2Q13542 120 aaPredicted RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 PRPSAP1Q14558 356 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 TAF11Q15544 211 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 KHDC1Q4VXA5 237 aaKnown RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 TIGD5Q53EQ6 642 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 ACSBG2Q5FVE4 666 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 NAPEPLDQ6IQ20 393 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 LINC00523Q86TU6 105 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 C10orf107Q8IVU9 208 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 CCDC117Q8IWD4 279 aaPredicted RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 DNAAF3Q8N9W5 541 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 ZSCAN18Q8TBC5 510 aaPredicted RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 DQX1Q8TE96 717 aaKnown RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 PPP1R2P1Q96PQ5 205 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 SORT1Q99523 831 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 PKMYT1Q99640 499 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 UPF3AQ9H1J1 476 aaKnown RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 ARHGEF38Q9NXL2 777 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 TMEM216Q9P0N5 145 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 CACNG4Q9UBN1 327 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 OR12D3Q9UGF7 316 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 MID2Q9UJV3 735 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 NEU3Q9UQ49 428 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 NLRC5Q86WI3 1866 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 MYADML2A6NDP7 307 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 ARHGAP42A6NI28 874 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 TMEM114B3SHH9 223 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 M0QZQ0 153 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 ITM2AO43736 263 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 TM7SF2O76062 418 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 PSMG1O95456 288 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 CHRNA1P02708 482 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 RALBP11234 206 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 CPA3P15088 417 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 ACADSP16219 412 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 DNAJB1P25685 340 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 AFF1P51825 1210 aaKnown RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 ABCE1P61221 599 aaKnown RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 IRX4P78413 519 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 CDH17Q12864 832 aa6.68□□□□□ -1.34
PTPRO-208ENST00000542557 KPNB1Q14974 876 aaKnown RBP6.68□□□□□ -1.34
PTPRO-208ENST00000542557 TRMT5Q32P41 509 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms