RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 TMEM215Q68D42 235 aa17.55■□□□□ 0.4
LIG1-204ENST00000542460 MBLAC2Q68D91 279 aa17.55■□□□□ 0.4
LIG1-204ENST00000542460 SLC9A4Q6AI14 798 aa17.55■□□□□ 0.4
LIG1-204ENST00000542460 RFX6Q8HWS3 928 aa17.55■□□□□ 0.4
LIG1-204ENST00000542460 APCDD1Q8J025 514 aa17.55■□□□□ 0.4
LIG1-204ENST00000542460 CCDC26Q8TAB7 109 aa17.55■□□□□ 0.4
LIG1-204ENST00000542460 EZH1Q92800 747 aaPredicted RBP17.55■□□□□ 0.4
LIG1-204ENST00000542460 ARHGEF2Q92974 986 aaKnown RBP17.55■□□□□ 0.4
LIG1-204ENST00000542460 TTC17Q96AE7 1141 aa17.55■□□□□ 0.4
LIG1-204ENST00000542460 KLC2Q9H0B6 622 aa17.55■□□□□ 0.4
LIG1-204ENST00000542460 CARD9Q9H257 536 aa17.55■□□□□ 0.4
LIG1-204ENST00000542460 MFSD1Q9H3U5 465 aa17.55■□□□□ 0.4
LIG1-204ENST00000542460 NOL6Q9H6R4 1146 aaKnown RBP17.55■□□□□ 0.4
LIG1-204ENST00000542460 C11orf16Q9NQ32 467 aa17.55■□□□□ 0.4
LIG1-204ENST00000542460 ELOVL2Q9NXB9 296 aa17.55■□□□□ 0.4
LIG1-204ENST00000542460 STARD13Q9Y3M8 1113 aa17.55■□□□□ 0.4
LIG1-204ENST00000542460 FAM170BA6NMN3 283 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 K7EQS6 105 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 KCNK3O14649 394 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 APOL1O14791 398 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 GPR37L1O60883 481 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 ATP5BP06576 529 aaKnown RBP17.54■□□□□ 0.4
LIG1-204ENST00000542460 TARSP26639 723 aaKnown RBP17.54■□□□□ 0.4
LIG1-204ENST00000542460 SULT2A1Q06520 285 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 ZNF211Q13398 564 aaPredicted RBP17.54■□□□□ 0.4
LIG1-204ENST00000542460 UBXN2BQ14CS0 331 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 AFMIDQ63HM1 303 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 KAZNQ674X7 775 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 NCBP2-AS2Q69YL0 99 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 ZNF687Q8N1G0 1237 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 NPWQ8N729 165 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 PLD5Q8N7P1 536 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 OR7D4Q8NG98 312 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 CELF6Q96J87 481 aaKnown RBP17.54■□□□□ 0.4
LIG1-204ENST00000542460 SPON2Q9BUD6 331 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 C2orf49Q9BVC5 232 aaPredicted RBP17.54■□□□□ 0.4
LIG1-204ENST00000542460 OSBPL8Q9BZF1 889 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 OSBPL6Q9BZF3 934 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 CIPCQ9C0C6 399 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 LRRC19Q9H756 370 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 ATP13A1Q9HD20 1204 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 MFHAS1Q9Y4C4 1052 aa17.54■□□□□ 0.4
LIG1-204ENST00000542460 RASA4BC9J798 803 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 NCAM2O15394 837 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 RASA4O43374 803 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 CST8O60676 142 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 CHRNB1P11230 501 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 LRRC32Q14392 662 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 E2F5Q15329 346 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 LLGL1Q15334 1064 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 SEL1L2Q5TEA6 688 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 IL31Q6EBC2 164 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 SFTPA1Q8IWL2 248 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 ARHGAP12Q8IWW6 846 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 SYNPOQ8N3V7 929 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 DCAF4L2Q8NA75 395 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 KCNV2Q8TDN2 545 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 UCMAQ8WVF2 138 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 ACDQ96AP0 544 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 WDR24Q96S15 920 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 HEMGNQ9BXL5 484 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 ACE2Q9BYF1 805 aaPredicted RBP17.53■□□□□ 0.4
LIG1-204ENST00000542460 FOXQ1Q9C009 403 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 SLC39A8Q9C0K1 460 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 HPCAL4Q9UM19 191 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 MTF2Q9Y483 593 aaPredicted RBP17.53■□□□□ 0.4
LIG1-204ENST00000542460 F5P12259 2224 aa17.53■□□□□ 0.4
LIG1-204ENST00000542460 TMEM221A6NGB7 291 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 ARHGAP42A6NI28 874 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 M0R296 226 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 ASLP04424 464 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 ATP1A1P05023 1023 aaKnown RBP17.52■□□□□ 0.4
LIG1-204ENST00000542460 DLDP09622 509 aaKnown RBP17.52■□□□□ 0.4
LIG1-204ENST00000542460 ACVRL1P37023 503 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 DYNLT1P63172 113 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 AADACL2Q6P093 401 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 PJA1Q8NG27 643 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 HMCESQ96FZ2 354 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 PSMB7Q99436 277 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 LMAN1LQ9HAT1 526 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 PLA2G4CQ9UP65 541 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 SIT1Q9Y3P8 196 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 TRIOO75962 3097 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 DOCK4Q8N1I0 1966 aa17.52■□□□□ 0.4
LIG1-204ENST00000542460 CXorf51AA0A1B0GTR3 108 aa17.52■□□□□ 0.39
LIG1-204ENST00000542460 CBX4O00257 560 aa17.52■□□□□ 0.39
LIG1-204ENST00000542460 DFFAO00273 331 aa17.52■□□□□ 0.39
LIG1-204ENST00000542460 KDELR3O43731 214 aa17.52■□□□□ 0.39
LIG1-204ENST00000542460 TJP3O95049 919 aa17.52■□□□□ 0.39
LIG1-204ENST00000542460 TGM2P21980 687 aa17.52■□□□□ 0.39
LIG1-204ENST00000542460 KIR2DL1P43626 348 aaPredicted RBP17.52■□□□□ 0.39
LIG1-204ENST00000542460 NR2C2P49116 596 aa17.52■□□□□ 0.39
LIG1-204ENST00000542460 PAPOLAP51003 745 aaKnown RBP17.52■□□□□ 0.39
LIG1-204ENST00000542460 ETF1P62495 437 aaKnown RBP17.52■□□□□ 0.39
LIG1-204ENST00000542460 ECT2LQ008S8 904 aa17.52■□□□□ 0.39
LIG1-204ENST00000542460 ADCY2Q08462 1091 aa17.52■□□□□ 0.39
LIG1-204ENST00000542460 FZD5Q13467 585 aa17.52■□□□□ 0.39
LIG1-204ENST00000542460 SERINC3Q13530 473 aa17.52■□□□□ 0.39
LIG1-204ENST00000542460 BBS12Q6ZW61 710 aa17.52■□□□□ 0.39
LIG1-204ENST00000542460 ZNF354CQ86Y25 554 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms