RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 ADPRHP54922 357 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 ZNF177Q13360 481 aaPredicted RBP16.08■□□□□ 0.16
VPS33A-206ENST00000542310 SUZ12Q15022 739 aaKnown RBP16.08■□□□□ 0.16
VPS33A-206ENST00000542310 KIF19Q2TAC6 998 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 SLC25A52Q3SY17 297 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 HSP90AA4PQ58FG1 418 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 FAM102AQ5T9C2 384 aaPredicted RBP16.08■□□□□ 0.16
VPS33A-206ENST00000542310 NCEH1Q6PIU2 408 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 LRSAM1Q6UWE0 723 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 ARCQ7LC44 396 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 ZNF677Q86XU0 584 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 XYLT1Q86Y38 959 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 STK40Q8N2I9 435 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 AADATQ8N5Z0 425 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 ENOX1Q8TC92 643 aaKnown RBP16.08■□□□□ 0.16
VPS33A-206ENST00000542310 EPS8L1Q8TE68 723 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 ADAMTS14Q8WXS8 1223 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 CDC6Q99741 560 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 FEM1AQ9BSK4 669 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 STK33Q9BYT3 514 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 NEUROG2Q9H2A3 272 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 KDM4CQ9H3R0 1056 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 SAMSN1Q9NSI8 373 aaKnown RBP16.08■□□□□ 0.16
VPS33A-206ENST00000542310 APOBEC2Q9Y235 224 aaKnown RBP16.08■□□□□ 0.16
VPS33A-206ENST00000542310 OR51B4Q9Y5P0 310 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 SNX11Q9Y5W9 270 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 SPEGQ15772 3267 aa16.08■□□□□ 0.16
VPS33A-206ENST00000542310 CHD5Q8TDI0 1954 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 ZFHX4Q86UP3 3567 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 IGF2RP11717 2491 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 VILLO15195 856 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 PCDHGA12O60330 932 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 CTSKP43235 329 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 NOMO3P69849 1222 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 INAVAQ3KP66 663 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 CDKAL1Q5VV42 579 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 RBM43Q6ZSC3 357 aaKnown RBP16.07■□□□□ 0.16
VPS33A-206ENST00000542310 BNIPLQ7Z465 357 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 ADAT2Q7Z6V5 191 aaKnown RBP16.07■□□□□ 0.16
VPS33A-206ENST00000542310 ERICH1Q86X53 443 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 ZNF683Q8IZ20 524 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 OR8D1Q8WZ84 308 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 SKA1Q96BD8 255 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 ACE2Q9BYF1 805 aaPredicted RBP16.07■□□□□ 0.16
VPS33A-206ENST00000542310 TKTL2Q9H0I9 626 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 GANQ9H2C0 597 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 WDCPQ9H6R7 721 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 LMBRD1Q9NUN5 540 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 VPS28Q9UK41 221 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 KLK13Q9UKR3 277 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 HS3ST2Q9Y278 367 aa16.07■□□□□ 0.16
VPS33A-206ENST00000542310 C1QTNF3-AMACRE9PGA6 284 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 ADCY5O95622 1261 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 IL1BP01584 269 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 TPM2P07951 284 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 DRD3P35462 400 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 NUDT1P36639 197 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 IRAK1P51617 712 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 KRT83P78385 493 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 DEUP1Q05D60 604 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 FAM46CQ5VWP2 391 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 SETD3Q86TU7 594 aaPredicted RBP16.06■□□□□ 0.16
VPS33A-206ENST00000542310 NOP9Q86U38 636 aaKnown RBP16.06■□□□□ 0.16
VPS33A-206ENST00000542310 SH2D3CQ8N5H7 860 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 DCAF4L2Q8NA75 395 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 OR52K2Q8NGK3 314 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 SETD7Q8WTS6 366 aaKnown RBP16.06■□□□□ 0.16
VPS33A-206ENST00000542310 C1orf74Q96LT6 269 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 SLC6A18Q96N87 628 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 C2orf49Q9BVC5 232 aaPredicted RBP16.06■□□□□ 0.16
VPS33A-206ENST00000542310 TAB2Q9NYJ8 693 aa16.06■□□□□ 0.16
VPS33A-206ENST00000542310 IGLV3-10A0A075B6K4 115 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 FAM47DPA6NHR8 397 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 YKT6O15498 198 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 LATO43561 262 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 DKK1O94907 266 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 RHOCP08134 193 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 VAV1P15498 845 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 TFE3P19532 575 aaPredicted RBP16.05■□□□□ 0.16
VPS33A-206ENST00000542310 GGCXP38435 758 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 GRK6P43250 576 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 CLCN6P51797 869 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 C21orf59P57076 290 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 TAF3Q5VWG9 929 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 LRRC31Q6UY01 552 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 C14orf80Q86SX3 495 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 CCDC114Q96M63 670 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 HAPLN3Q96S86 360 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 TBCBQ99426 244 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 SIK2Q9H0K1 926 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 MUC3BQ9H195 1237 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 ANLNQ9NQW6 1124 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 TMEM59LQ9UK28 342 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 NOCTQ9UK39 431 aaKnown RBP16.05■□□□□ 0.16
VPS33A-206ENST00000542310 ZMIZ1Q9ULJ6 1067 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 PLXNB3Q9ULL4 1909 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 CFAP47Q6ZTR5 3102 aa16.05■□□□□ 0.16
VPS33A-206ENST00000542310 AKAP13Q12802 2813 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 DRGXA6NNA5 263 aa16.04■□□□□ 0.16
VPS33A-206ENST00000542310 I6L893 689 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms