RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 RFWD3Q6PCD5 774 aa17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 SPATA31D4Q6ZUB0 917 aa17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 CFAP52Q8N1V2 620 aa17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 HMCESQ96FZ2 354 aa17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 C1orf74Q96LT6 269 aa17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 RC3H2Q9HBD1 1191 aaKnown RBP17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 C5orf42Q9H799 3197 aa17.63■□□□□ 0.41
TMEM50B-210ENST00000542230 TRDMT1O14717 391 aaKnown RBP17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 FGF10O15520 208 aaPredicted RBP17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 SPAG6O75602 509 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 PARNO95453 639 aaKnown RBP17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 ERVK-10P10266 1014 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 HMGA1P17096 107 aaKnown RBP17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 ADRA1DP25100 572 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 WDR5P61964 334 aaKnown RBP17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 RPL10AP62906 217 aaKnown RBP17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 MROH9Q5TGP6 573 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 CDHR3Q6ZTQ4 885 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 BANPQ8N9N5 519 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 DNAAF3Q8N9W5 541 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 TCP10LQ8TDR4 215 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 ZNF512Q96ME7 567 aaPredicted RBP17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 ZNF778Q96MU6 729 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 KLHL5Q96PQ7 755 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 TGS1Q96RS0 853 aaKnown RBP17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 BRD8Q9H0E9 1235 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 CYP4F11Q9HBI6 524 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 WDR91A4D1P6 747 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 ATP9BO43861 1147 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 CSPG5O95196 566 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 MT-ND3P03897 115 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 HLA-DQB2P05538 268 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 TAC1P20366 129 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 CCNCP24863 283 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 GJA8P48165 433 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 IFT88Q13099 833 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 BTG3Q14201 252 aaPredicted RBP17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 NUGGCQ68CJ6 796 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 FAM47EQ6ZV65 393 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 SLC39A11Q8N1S5 342 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 ATP2A3Q93084 1043 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 WBP2Q969T9 261 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 TSGA13Q96PP4 275 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 PPCSQ9HAB8 311 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 GKN1Q9NS71 199 aa17.62■□□□□ 0.41
TMEM50B-210ENST00000542230 SUN1O94901 812 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 IGLV3-27P01718 113 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 SOD2P04179 222 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 GMPRP36959 345 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 IHHQ14623 411 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 STEAP4Q687X5 459 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 LVRNQ6Q4G3 990 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 MFSD3Q96ES6 412 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 BTN2A3PQ96KV6 586 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 ATXN3LQ9H3M9 355 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 C11orf49Q9H6J7 331 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 SLCO1B3Q9NPD5 702 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 CHRAC1Q9NRG0 131 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 IPO11Q9UI26 975 aaKnown RBP17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 TRHDEQ9UKU6 1024 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 BACE2Q9Y5Z0 518 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 RPS6KL1Q9Y6S9 549 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 FAM169AQ9Y6X4 670 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 MATN3O15232 486 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 GJB3O75712 270 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 PEX11BO96011 259 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 CGB2Q6NT52 195 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 ZNF461Q8TAF7 563 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 THOC1Q96FV9 657 aaKnown RBP17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 IL12RB2Q99665 862 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 TTLL2Q9BWV7 592 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 UBE2OQ9C0C9 1292 aaKnown RBP17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 ZYG11BQ9C0D3 744 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 CASS4Q9NQ75 786 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 RBM22Q9NW64 420 aaKnown RBP eCLIP17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 ZNF212Q9UDV6 495 aa17.61■□□□□ 0.41
TMEM50B-210ENST00000542230 ZNF840PA6NDX5 716 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 GOLGA8TH3BQL2 631 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 ABLIM3O94929 683 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 TIMP1P01033 207 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 SLC2A3P11169 496 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 SLC6A4P31645 630 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 MAXP61244 160 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 NRG1Q02297 640 aaPredicted RBP17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 SPRED3Q2MJR0 410 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 TMEM169Q96HH4 297 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 ZNF558Q96NG5 402 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 RPRD1AQ96P16 312 aaPredicted RBP17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 RNF38Q9H0F5 515 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 SENP1Q9P0U3 644 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 IQANK1A0A1B0GTG1 560 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 C2orf78A6NCI8 922 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 MTSS1O43312 755 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 COCHO43405 550 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 RFPL1O75677 317 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 ALDH1A2O94788 518 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 PGAM1P18669 254 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 ABCG1P45844 678 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 PSEN1P49768 467 aa17.6■□□□□ 0.41
TMEM50B-210ENST00000542230 SMARCB1Q12824 385 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms