RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 CRTC1Q6UUV9 634 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CENPUQ71F23 418 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 SPATC1Q76KD6 591 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CYB5R4Q7L1T6 521 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 MAEAQ7L5Y9 396 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 ARPINQ7Z6K5 226 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 SLFN11Q7Z7L1 901 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 FERMT3Q86UX7 667 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 RIOX2Q8IUF8 465 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 LACC1Q8IV20 430 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 RCOR2Q8IZ40 523 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 IFNL3Q8IZI9 196 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 SYNPOQ8N3V7 929 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 FBXL6Q8N531 539 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CCNYL1Q8N7R7 359 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 KCNH5Q8NCM2 988 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 ZSWIM2Q8NEG5 633 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 OR6S1Q8NH40 331 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 DNAJB8Q8NHS0 232 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 XAGE3Q8WTP9 111 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 GRK7Q8WTQ7 553 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 PPP1R13LQ8WUF5 828 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 FAM172AQ8WUF8 416 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 FBLIM1Q8WUP2 373 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 NRG4Q8WWG1 115 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 FATE1Q969F0 183 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CAPZA3Q96KX2 299 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 KREMEN1Q96MU8 473 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 PSMG3-AS1Q96PY0 264 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 DOK1Q99704 481 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 APBA2Q99767 749 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 MIPEPQ99797 713 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 PYM1Q9BRP8 204 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.44□□□□□ -1.74e-59■■■□□ 16.1
SNHG1-219ENST00000542112 EFHD1Q9BUP0 239 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 SPATA9Q9BWV2 254 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 ASPNQ9BXN1 380 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 ZNF717Q9BY31 904 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 MTMR12Q9C0I1 747 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 PAIP1Q9H074 479 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 KIAA1683Q9H0B3 1180 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 C1orf21Q9H246 121 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 LHX5Q9H2C1 402 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 MRM3Q9HC36 420 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 KIAA1586Q9HCI6 787 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 TUFT1Q9NNX1 390 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 OLFML3Q9NRN5 406 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 IARS2Q9NSE4 1012 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 DNAJC17Q9NVM6 304 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 TMEM260Q9NX78 707 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 GDAP2Q9NXN4 497 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 GPRC5DQ9NZD1 345 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 BCAP29Q9UHQ4 241 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 PFDN2Q9UHV9 154 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 GLS2Q9UI32 602 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 VPS51Q9UID3 782 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 LAMP5Q9UJQ1 280 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 TMEM59LQ9UK28 342 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 TLK1Q9UKI8 766 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CAPN11Q9UMQ6 739 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 CLEC4AQ9UMR7 237 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 EIF3LQ9Y262 564 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 ZHX2Q9Y6X8 837 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 LTN1O94822 1766 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 RGPD2P0DJD1 1756 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 RGPD5Q99666 1765 aa4.44□□□□□ -1.7
SNHG1-219ENST00000542112 SF3B1O75533 1304 aaKnown RBP eCLIP4.44□□□□□ -1.72e-7■■■■■ 35.3
SNHG1-219ENST00000542112 USP42Q9H9J4 1324 aaKnown RBP4.44□□□□□ -1.7
SNHG1-219ENST00000542112 RFX7Q2KHR2 1363 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 FAM95CA0A1B0GW59 222 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 ESYT2A0FGR8 921 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 DBX1A6NMT0 343 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TCP11X1B4DZS4 312 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 K7ENM7 598 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 RNF225M0QZC1 329 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 LAD1O00515 517 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 SLC22A2O15244 555 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 GSC2O15499 205 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 KCNN4O15554 427 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 DHX15O43143 795 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TOM1O60784 492 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 NOL3O60936 208 aaKnown RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 NOS1APO75052 506 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 NIPSNAP2O75323 286 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 ENTPD5O75356 428 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 MYO1DO94832 1006 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 HAUS5O94927 633 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 NPPAP01160 153 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 GYPCP04921 128 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 KRT8P05787 483 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 PGK2P07205 417 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 C6orf222P0C671 652 aaPredicted RBP4.43□□□□□ -1.7
SNHG1-219ENST00000542112 FAM58BPP0C7Q3 252 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TRAPPC2P0DI81 140 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 TRAPPC2BP0DI82 140 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 SRGAP2CP0DJJ0 459 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 ACTN1P12814 892 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 CCDC130P13994 396 aa4.43□□□□□ -1.7
SNHG1-219ENST00000542112 STMN1P16949 149 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms