RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 CNTN6Q9UQ52 1028 aa3.97□□□□□ -1.77
LEMD3-204ENST00000542032 KAT6BQ8WYB5 2073 aa3.96□□□□□ -1.77
LEMD3-204ENST00000542032 DPPA5A6NC42 116 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 GAGE12JA6NER3 117 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 AQP12BA6NM10 295 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 KIF28PB7ZC32 967 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 RNASEH2AO75792 299 aaKnown RBP3.96□□□□□ -1.78
LEMD3-204ENST00000542032 LCKP06239 509 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 PEPDP12955 493 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 GRK5P34947 590 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 PPM1AP35813 382 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 CDKN2AP42771 156 aaKnown RBP3.96□□□□□ -1.78
LEMD3-204ENST00000542032 PTK2BQ14289 1009 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 SPARCL1Q14515 664 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 PUM3Q15397 648 aaKnown RBP3.96□□□□□ -1.78
LEMD3-204ENST00000542032 JAKMIP3Q5VZ66 844 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 RINLQ6ZS11 566 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 KDELC2Q7Z4H8 507 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 GATAD2AQ86YP4 633 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 GPSM1Q86YR5 675 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 SUGP1Q8IWZ8 645 aaKnown RBP3.96□□□□□ -1.78
LEMD3-204ENST00000542032 TMEM199Q8N511 208 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 MYCT1Q8N699 235 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 PPHLN1Q8NEY8 458 aaKnown RBP3.96□□□□□ -1.78
LEMD3-204ENST00000542032 OR1N1Q8NGS0 311 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 ADAMTS15Q8TE58 950 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 STYXQ8WUJ0 223 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 CENPIQ92674 756 aaPredicted RBP3.96□□□□□ -1.78
LEMD3-204ENST00000542032 SKA1Q96BD8 255 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 OSBPL5Q9H0X9 879 aaPredicted RBP3.96□□□□□ -1.78
LEMD3-204ENST00000542032 HIPK2Q9H2X6 1198 aa3.96□□□□□ -1.78
LEMD3-204ENST00000542032 MRPL44Q9H9J2 332 aaKnown RBP3.96□□□□□ -1.78
LEMD3-204ENST00000542032 COPG1Q9Y678 874 aaKnown RBP3.96□□□□□ -1.78
LEMD3-204ENST00000542032 MBD3L5A6NJ08 208 aaPredicted RBP3.95□□□□□ -1.78
LEMD3-204ENST00000542032 MCIDASD6RGH6 385 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 GTPBP1O00178 669 aaKnown RBP3.95□□□□□ -1.78
LEMD3-204ENST00000542032 LARGE1O95461 756 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 NFATC1O95644 943 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 KLKB1P03952 638 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 PYGLP06737 847 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 CIITAP33076 1130 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 TECP42680 631 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 RASSF2P50749 326 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 RHAGQ02094 409 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 PPATQ06203 517 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 SF3A3Q12874 501 aaKnown RBP eCLIP3.95□□□□□ -1.78
LEMD3-204ENST00000542032 Q5PR19 223 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 C10orf76Q5T2E6 689 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 KIAA1161Q6NSJ0 714 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 CYB5R4Q7L1T6 521 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 MYLK4Q86YV6 388 aaPredicted RBP3.95□□□□□ -1.78
LEMD3-204ENST00000542032 IL17REQ8NFR9 667 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 CLEC4CQ8WTT0 213 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 LPAR1Q92633 364 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 URB1-AS1Q96HZ7 61 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 CCDC134Q9H6E4 229 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 PGAP2Q9UHJ9 254 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 SLC8A2Q9UPR5 921 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 DTX4Q9Y2E6 619 aa3.95□□□□□ -1.78
LEMD3-204ENST00000542032 CLEC18AA5D8T8 446 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 CXorf65A6NEN9 183 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 TNFRSF13BO14836 293 aaPredicted RBP3.94□□□□□ -1.78
LEMD3-204ENST00000542032 KRT10P13645 584 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 CALRP27797 417 aaKnown RBP3.94□□□□□ -1.78
LEMD3-204ENST00000542032 AKT1P31749 480 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 CASP2P42575 452 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 GRK6P43250 576 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 MAPK9P45984 424 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 RFX2P48378 723 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 GAD2Q05329 585 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 BTBD16Q32M84 506 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 PARM1Q6UWI2 310 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 CCDC89Q8N998 374 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 KDM1BQ8NB78 822 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 CLEC18CQ8NCF0 446 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 CCT6BQ92526 530 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 IP6K1Q92551 441 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 ZNF479Q96JC4 524 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 ADAD1Q96M93 576 aaKnown RBP3.94□□□□□ -1.78
LEMD3-204ENST00000542032 KATNAL1Q9BW62 490 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 FRMD8Q9BZ67 464 aaPredicted RBP3.94□□□□□ -1.78
LEMD3-204ENST00000542032 SIRT3Q9NTG7 399 aaPredicted RBP3.94□□□□□ -1.78
LEMD3-204ENST00000542032 RNF146Q9NTX7 359 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 RRN3Q9NYV6 651 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.94□□□□□ -1.78
LEMD3-204ENST00000542032 PCDHA7Q9UN72 937 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 TNFSF13BQ9Y275 285 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 PKP3Q9Y446 797 aa3.94□□□□□ -1.78
LEMD3-204ENST00000542032 A0A087WV62 115 aa3.93□□□□□ -1.78
LEMD3-204ENST00000542032 TBC1D3DA0A087WVF3 549 aa3.93□□□□□ -1.78
LEMD3-204ENST00000542032 TBC1D3IA0A087WXS9 549 aa3.93□□□□□ -1.78
LEMD3-204ENST00000542032 TBC1D3EA0A087X179 549 aa3.93□□□□□ -1.78
LEMD3-204ENST00000542032 TBC1D3KA0A087X1G2 549 aa3.93□□□□□ -1.78
LEMD3-204ENST00000542032 TRBV5-7A0A0A0MS05 114 aa3.93□□□□□ -1.78
LEMD3-204ENST00000542032 TBC1D3BA6NDS4 549 aa3.93□□□□□ -1.78
LEMD3-204ENST00000542032 TBC1D3FA6NER0 549 aaPredicted RBP3.93□□□□□ -1.78
LEMD3-204ENST00000542032 LGALS16A8MUM7 142 aa3.93□□□□□ -1.78
LEMD3-204ENST00000542032 TBC1D3LB9A6J9 549 aa3.93□□□□□ -1.78
LEMD3-204ENST00000542032 H0YGN5 161 aa3.93□□□□□ -1.78
LEMD3-204ENST00000542032 EYA2O00167 538 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms