RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 DTLQ9NZJ0 730 aa9.59□□□□□ -0.87
DDX55-208ENST00000541259 THEGQ9P2T0 379 aa9.59□□□□□ -0.87
DDX55-208ENST00000541259 EFR3BQ9Y2G0 817 aa9.59□□□□□ -0.87
DDX55-208ENST00000541259 HEY1Q9Y5J3 304 aa9.59□□□□□ -0.87
DDX55-208ENST00000541259 MRFAP1Q9Y605 127 aa9.59□□□□□ -0.87
DDX55-208ENST00000541259 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.58□□□□□ -0.88
DDX55-208ENST00000541259 A0A1B0GVM2 712 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 TCAF2A6NFQ2 919 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 H0Y626 953 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 ARNTLO00327 626 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 NARSO43776 548 aaKnown RBP9.58□□□□□ -0.88
DDX55-208ENST00000541259 CLDN11O75508 207 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 LUC7L3O95232 432 aaKnown RBP9.58□□□□□ -0.88
DDX55-208ENST00000541259 NFATC1O95644 943 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 CYBBP04839 570 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 ADH5P11766 374 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 TGM2P21980 687 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 OR1E1P30953 314 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 ACVRL1P37023 503 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 SLC6A11P48066 632 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 SOX9P48436 509 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 OTUD4Q01804 1114 aaKnown RBP9.58□□□□□ -0.88
DDX55-208ENST00000541259 ZNF177Q13360 481 aaPredicted RBP9.58□□□□□ -0.88
DDX55-208ENST00000541259 RUNX3Q13761 415 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 CCDC181Q5TID7 509 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 TTC39BQ5VTQ0 682 aaPredicted RBP9.58□□□□□ -0.88
DDX55-208ENST00000541259 RNF219Q5W0B1 726 aaPredicted RBP9.58□□□□□ -0.88
DDX55-208ENST00000541259 AFMIDQ63HM1 303 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 NAIF1Q69YI7 327 aaPredicted RBP9.58□□□□□ -0.88
DDX55-208ENST00000541259 CXorf57Q6NSI4 855 aaKnown RBP9.58□□□□□ -0.88
DDX55-208ENST00000541259 ARHGAP36Q6ZRI8 547 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 C12orf40Q86WS4 652 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 UMODL1-AS1Q8N2C9 162 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 PRELID2Q8N945 189 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 OR7D4Q8NG98 312 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 ACTL9Q8TC94 416 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 ATG4AQ8WYN0 398 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 ATP2A3Q93084 1043 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 CHFRQ96EP1 664 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 BRD9Q9H8M2 597 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 MARK1Q9P0L2 795 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 FAM50BQ9Y247 325 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 TBC1D30Q9Y2I9 924 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 ANKRD36A6QL64 1941 aa9.58□□□□□ -0.88
DDX55-208ENST00000541259 A0A0D9SEW6 157 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 TYW5A2RUC4 315 aaKnown RBP9.57□□□□□ -0.88
DDX55-208ENST00000541259 RASA4BC9J798 803 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 APOC4-APOC2K7ER74 178 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 DFFAO00273 331 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 KRIT1O00522 736 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 HOXC11O43248 304 aaPredicted RBP9.57□□□□□ -0.88
DDX55-208ENST00000541259 RASA4O43374 803 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 ADH1CP00326 375 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 APOC2P02655 101 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 RHOCP08134 193 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 CISD3P0C7P0 127 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 ZFXP17010 805 aaPredicted RBP9.57□□□□□ -0.88
DDX55-208ENST00000541259 MZF1P28698 734 aaPredicted RBP9.57□□□□□ -0.88
DDX55-208ENST00000541259 CD70P32970 193 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 GJA4P35212 333 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 PAFAH1B1P43034 410 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 MAPKAPK2P49137 400 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 PAPOLAP51003 745 aaKnown RBP9.57□□□□□ -0.88
DDX55-208ENST00000541259 GAD2Q05329 585 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 ZP2Q05996 745 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 MESP2Q0VG99 397 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 LMAN2Q12907 356 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 SNX1Q13596 522 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 POLD3Q15054 466 aaPredicted RBP9.57□□□□□ -0.88
DDX55-208ENST00000541259 NOMO1Q15155 1222 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 MPP7Q5T2T1 576 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 ZC3H18Q86VM9 953 aaKnown RBP9.57□□□□□ -0.88
DDX55-208ENST00000541259 MFN1Q8IWA4 741 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 ADHFE1Q8IWW8 467 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 APCDD1Q8J025 514 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 FIBINQ8TAL6 211 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 P3H4Q92791 437 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 HMCESQ96FZ2 354 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 LMLNQ96KR4 655 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 LRRC19Q9H756 370 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 PRDM16Q9HAZ2 1276 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 IGSF9Q9P2J2 1179 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 RNF14Q9UBS8 474 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 FBXO10Q9UK96 956 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 INTS6Q9UL03 887 aaKnown RBP9.57□□□□□ -0.88
DDX55-208ENST00000541259 DNPEPQ9ULA0 475 aa9.57□□□□□ -0.88
DDX55-208ENST00000541259 ILVBLA1L0T0 632 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 CACNG3O60359 315 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 RAMP2O60895 175 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 TULP3O75386 442 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 BMP1P13497 986 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 GLDCP23378 1020 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 HLA-FP30511 346 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 SERPINB6P35237 376 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 OPRD1P41143 372 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 CSKP41240 450 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 KCNJ1P48048 391 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 NDST2P52849 883 aa9.56□□□□□ -0.88
DDX55-208ENST00000541259 EIF3EP60228 445 aaKnown RBP9.56□□□□□ -0.88
DDX55-208ENST00000541259 GNA12Q03113 381 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms