RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 GADL1Q6ZQY3 521 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 DEFB106AQ8N104 65 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 CCNYL1Q8N7R7 359 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 USP33Q8TEY7 942 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 NLRP7Q8WX94 980 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 ATP6V1E2Q96A05 226 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 TXNRD2Q9NNW7 524 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 SNTG2Q9NY99 539 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 DCDC2Q9UHG0 476 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 MTF2Q9Y483 593 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 TMX2-CTNND1H3BSU7 103 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 XPO1O14980 1071 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 MDM4O15151 490 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 PGAM1P18669 254 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 R3HDM1Q15032 1099 aaKnown RBP10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 KIZQ2M2Z5 673 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 STEAP4Q687X5 459 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 CYP2R1Q6VVX0 501 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 GK5Q6ZS86 529 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 DRAXINQ8NBI3 349 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 CEP70Q8NHQ1 597 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 FAM81AQ8TBF8 368 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 SLC2A14Q8TDB8 520 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 KCTD4Q8WVF5 259 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 VCX3BQ9H321 246 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 TASP1Q9H6P5 420 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 AS3MTQ9HBK9 375 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 VCX3AQ9NNX9 186 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 GALNT8Q9NY28 637 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 KLHL8Q9P2G9 620 aaPredicted RBP10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 DNAJB4Q9UDY4 337 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 PCDHB12Q9Y5F1 795 aa10.58□□□□□ -0.72
CDC42SE1-207ENST00000540998 C9JVG2 144 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 RNASEH2AO75792 299 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 SBK3P0C264 359 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 EPHX2P34913 555 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 GP5P40197 560 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 GRIA4P48058 902 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 SULT1E1P49888 294 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 OAZ1P54368 228 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 CDH15P55291 814 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 INCA1Q0VD86 236 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 PABPC1LQ4VXU2 614 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 PKDCCQ504Y2 493 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 LRRC8BQ6P9F7 803 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 MOB2Q70IA6 237 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 ADGRG6Q86SQ4 1221 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 SNRNP27Q8WVK2 155 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 SCYL1Q96KG9 808 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 LRGUKQ96M69 825 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 OLFM3Q96PB7 478 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 SLC39A3Q9BRY0 314 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 SLC4A5Q9BY07 1137 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 EIF2AQ9BY44 585 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 MRPL1Q9BYD6 325 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 HOXC10Q9NYD6 342 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 USP3Q9Y6I4 520 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 COMMD3-BMI1R4GMX3 469 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 IL18RAPO95256 599 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 C22orf31O95567 290 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 ASLP04424 464 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 TSPAN8P19075 237 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 NMBRP28336 390 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 GALK1P51570 392 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 ADIGQ0VDE8 80 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 DYNC1I2Q13409 638 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 GRM3Q14832 879 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 CELF3Q5SZQ8 465 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 DNERQ8NFT8 737 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 RAB3IL1Q8TBN0 382 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 TRIM8Q9BZR9 551 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 C2orf40Q9H1Z8 148 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 TNFRSF12AQ9NP84 129 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 C20orf96Q9NUD7 363 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 PLOD2O00469 737 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 SPTLC1O15269 473 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 TXNP10599 105 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 HNRNPLP14866 589 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 MX2P20592 715 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 PLK1P53350 603 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 OTUD1Q5VV17 481 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 IL23RQ5VWK5 629 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 TMEM110Q86TL2 294 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 NPWQ8N729 165 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 URGCPQ8TCY9 931 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 ABTB1Q969K4 478 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 KLRG1Q96E93 195 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 CELF6Q96J87 481 aaKnown RBP10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 RBBP8Q99708 897 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 APBA2Q99767 749 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 SPATC1LQ9H0A9 340 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 NMRAL1Q9HBL8 299 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 CYP4F12Q9HCS2 524 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 ADA2Q9NZK5 511 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 RIMS3Q9UJD0 308 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 PSMD13Q9UNM6 376 aa10.57□□□□□ -0.72
CDC42SE1-207ENST00000540998 POLR2AP24928 1970 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 KCNU1A8MYU2 1149 aa10.56□□□□□ -0.72
CDC42SE1-207ENST00000540998 C9IYK1 514 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms