RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ETFBP38117 255 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 NNMTP40261 264 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 WASP42768 502 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 NUMBP49757 651 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 CCR3P51677 355 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 YBEYP58557 167 aaPredicted RBP15.89■□□□□ 0.13
DDB1-218ENST00000540784 ST8SIA6P61647 398 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 DPYSQ14117 519 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 POLD3Q15054 466 aaPredicted RBP15.89■□□□□ 0.13
DDB1-218ENST00000540784 FNDC3BQ53EP0 1204 aaKnown RBP15.89■□□□□ 0.13
DDB1-218ENST00000540784 IL31Q6EBC2 164 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 PKN3Q6P5Z2 889 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 SYT13Q7L8C5 426 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 C1orf210Q8IVY1 113 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 UMODL1-AS1Q8N2C9 162 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 OR7D4Q8NG98 312 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 RAPGEF5Q92565 580 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 TSC1Q92574 1164 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 ACOX2Q99424 681 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 C2orf49Q9BVC5 232 aaPredicted RBP15.89■□□□□ 0.13
DDB1-218ENST00000540784 KCNF1Q9H3M0 494 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 LZTFL1Q9NQ48 299 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 KLHL11Q9NVR0 708 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 AMFRQ9UKV5 643 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 MMP17Q9ULZ9 603 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 HPCAL4Q9UM19 191 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 SLC8A2Q9UPR5 921 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 ERVW-1Q9UQF0 538 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 STON1Q9Y6Q2 735 aa15.89■□□□□ 0.13
DDB1-218ENST00000540784 WASH3PC4AMC7 463 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 SGK1O00141 431 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 PSTPIP1O43586 416 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 SRPRAP08240 638 aaKnown RBP15.88■□□□□ 0.13
DDB1-218ENST00000540784 CHRM1P11229 460 aaPredicted RBP15.88■□□□□ 0.13
DDB1-218ENST00000540784 CTSOP43234 321 aaPredicted RBP15.88■□□□□ 0.13
DDB1-218ENST00000540784 NDST2P52849 883 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 MMRN1Q13201 1228 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 DPYSL3Q14195 570 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 ZNF234Q14588 700 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 PTPRNQ16849 979 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 ANKRD20A8PQ5CZ79 823 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 SERPINA13PQ6UXR4 307 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 PEX26Q7Z412 305 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 RCOR2Q8IZ40 523 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 LZTR1Q8N653 840 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 LRRC57Q8N9N7 239 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 ARHGEF2Q92974 986 aaKnown RBP15.88■□□□□ 0.13
DDB1-218ENST00000540784 RNF25Q96BH1 459 aaPredicted RBP15.88■□□□□ 0.13
DDB1-218ENST00000540784 MAK16Q9BXY0 300 aaKnown RBP15.88■□□□□ 0.13
DDB1-218ENST00000540784 ATP13A1Q9HD20 1204 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 CACNA2D2Q9NY47 1150 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 PCDHA3Q9Y5H8 950 aa15.88■□□□□ 0.13
DDB1-218ENST00000540784 LRRD1A4D1F6 860 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 CBX4O00257 560 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 ZSCAN12O43309 604 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 ADAM23O75077 832 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 ZRANB2O95218 330 aaKnown RBP eCLIP15.87■□□□□ 0.13
DDB1-218ENST00000540784 KRT1P04264 644 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 ACVRL1P37023 503 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 IL12RB1P42701 662 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 SATB1Q01826 763 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 SLC20A2Q08357 652 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 PARP15Q460N3 678 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 RETSATQ6NUM9 610 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 TMCO3Q6UWJ1 677 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 ZNF354CQ86Y25 554 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 KDM1BQ8NB78 822 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 RPL10LQ96L21 214 aaKnown RBP15.87■□□□□ 0.13
DDB1-218ENST00000540784 PSMB7Q99436 277 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 GABRG3Q99928 467 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 ZNF670Q9BS34 389 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 ACE2Q9BYF1 805 aaPredicted RBP15.87■□□□□ 0.13
DDB1-218ENST00000540784 NOL6Q9H6R4 1146 aaKnown RBP15.87■□□□□ 0.13
DDB1-218ENST00000540784 POLR3BQ9NW08 1133 aaPredicted RBP15.87■□□□□ 0.13
DDB1-218ENST00000540784 SUN2Q9UH99 717 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 SLCO3A1Q9UIG8 710 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 SLC25A13Q9UJS0 675 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 CUL9Q8IWT3 2517 aa15.87■□□□□ 0.13
DDB1-218ENST00000540784 MIA3Q5JRA6 1907 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 RASA4BC9J798 803 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 ZBTB24O43167 697 aaPredicted RBP15.86■□□□□ 0.13
DDB1-218ENST00000540784 RASA4O43374 803 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 GALR2O43603 387 aaPredicted RBP15.86■□□□□ 0.13
DDB1-218ENST00000540784 KDELR3O43731 214 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 SYNCRIPO60506 623 aaKnown RBP15.86■□□□□ 0.13
DDB1-218ENST00000540784 SNAP91O60641 907 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 HOXB2P14652 356 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 DGKEP52429 567 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 ENPP2Q13822 863 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 CRY1Q16526 586 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 ACCSLQ4AC99 568 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 NT5DC3Q86UY8 548 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 KATNAL2Q8IYT4 538 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 DCAF4L2Q8NA75 395 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 PCDH19Q8TAB3 1148 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 UBE2Q2Q8WVN8 375 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 CELF6Q96J87 481 aaKnown RBP15.86■□□□□ 0.13
DDB1-218ENST00000540784 MRGPRX3Q96LB0 322 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 RNF157Q96PX1 679 aa15.86■□□□□ 0.13
DDB1-218ENST00000540784 SLC39A8Q9C0K1 460 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms