RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 C1orf216Q8TAB5 229 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 SLC30A5Q8TAD4 765 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 EPS8L1Q8TE68 723 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 SETD7Q8WTS6 366 aaKnown RBP9.27□□□□□ -0.93
LMO3-222ENST00000540445 SLC20A1Q8WUM9 679 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 PTPRN2Q92932 1015 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 CFAP57Q96MR6 1250 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 FAM129BQ96TA1 746 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 GAREM1Q9H706 876 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 SEPT11Q9NVA2 429 aaKnown RBP9.27□□□□□ -0.93
LMO3-222ENST00000540445 TMEM51Q9NW97 253 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 ARHGEF38Q9NXL2 777 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 VPS28Q9UK41 221 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.27□□□□□ -0.93
LMO3-222ENST00000540445 TRPM6Q9BX84 2022 aa9.27□□□□□ -0.93
LMO3-222ENST00000540445 CHD5Q8TDI0 1954 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 TBC1D3DA0A087WVF3 549 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 TBC1D3IA0A087WXS9 549 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 TBC1D3EA0A087X179 549 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 TBC1D3KA0A087X1G2 549 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 A0A1B0GVT2 93 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 TBC1D3FA6NER0 549 aaPredicted RBP9.26□□□□□ -0.93
LMO3-222ENST00000540445 TBC1D3LB9A6J9 549 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 SH3BP5O60239 455 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 CNTN5O94779 1100 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 ADH1BP00325 375 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 PROS1P07225 676 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 RHOCP08134 193 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 TBC1D3HP0C7X1 549 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 VAV1P15498 845 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 GOT1P17174 413 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 C5AR1P21730 350 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 CD27P26842 260 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 OR1E1P30953 314 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 FLT3P36888 993 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 SCNN1AP37088 669 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 IRAK1P51617 712 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 NOMO3P69849 1222 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 FAM193AP78312 1265 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 KRT83P78385 493 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 CDR2Q01850 454 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 BNC1Q01954 994 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 MYL5Q02045 173 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 TRIP6Q15654 476 aaKnown RBP9.26□□□□□ -0.93
LMO3-222ENST00000540445 CDO1Q16878 200 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 HLA-BQ31612 363 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 ALFQ53S48 1182 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 CCDC183Q5T5S1 534 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 ACBD5Q5T8D3 534 aaPredicted RBP9.26□□□□□ -0.93
LMO3-222ENST00000540445 KIAA0895LQ68EN5 471 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 TBC1D3GQ6DHY5 549 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 TBC1D3CQ6IPX1 549 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 CXorf57Q6NSI4 855 aaKnown RBP9.26□□□□□ -0.93
LMO3-222ENST00000540445 NCEH1Q6PIU2 408 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.26□□□□□ -0.93
LMO3-222ENST00000540445 DSG4Q86SJ6 1040 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 TBC1D3Q8IZP1 549 aaPredicted RBP9.26□□□□□ -0.93
LMO3-222ENST00000540445 EMC1Q8N766 993 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 OR8D1Q8WZ84 308 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 NT5C3BQ969T7 300 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 PGAP3Q96FM1 320 aaPredicted RBP9.26□□□□□ -0.93
LMO3-222ENST00000540445 C1orf74Q96LT6 269 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 CAMK1GQ96NX5 476 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 ADAM33Q9BZ11 813 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 NAT10Q9H0A0 1025 aaKnown RBP9.26□□□□□ -0.93
LMO3-222ENST00000540445 GANQ9H2C0 597 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 IL21RQ9HBE5 538 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 METTL5Q9NRN9 209 aaKnown RBP9.26□□□□□ -0.93
LMO3-222ENST00000540445 TMPRSS4Q9NRS4 437 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 TM7SF3Q9NS93 570 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 MPP6Q9NZW5 540 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 TBC1D30Q9Y2I9 924 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 FARP1Q9Y4F1 1045 aaPredicted RBP9.26□□□□□ -0.93
LMO3-222ENST00000540445 SNX10Q9Y5X0 201 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 ITIH6Q6UXX5 1313 aa9.26□□□□□ -0.93
LMO3-222ENST00000540445 FREM2Q5SZK8 3169 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 ZFHX4Q86UP3 3567 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 C1QTNF9BB2RNN3 333 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 C10orf142B7Z368 130 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 E9PAM4 449 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 KCNK3O14649 394 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 EPHB6O15197 1021 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 C1QTNF9P0C862 333 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 CHRNB2P17787 502 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 SPINK2P20155 84 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 NSFP46459 744 aaKnown RBP9.25□□□□□ -0.93
LMO3-222ENST00000540445 C21orf59P57076 290 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 JAM2P57087 298 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 FMO1Q01740 532 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 HNRNPDQ14103 355 aaKnown RBP9.25□□□□□ -0.93
LMO3-222ENST00000540445 ELAVL3Q14576 367 aaKnown RBP9.25□□□□□ -0.93
LMO3-222ENST00000540445 SUZ12Q15022 739 aaKnown RBP9.25□□□□□ -0.93
LMO3-222ENST00000540445 DLG2Q15700 870 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 KIF19Q2TAC6 998 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 ARL13BQ3SXY8 428 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 POM121L1PQ3SYA9 428 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 C5orf22Q49AR2 442 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 C6orf118Q5T5N4 469 aa9.25□□□□□ -0.93
LMO3-222ENST00000540445 OTUD1Q5VV17 481 aaPredicted RBP9.25□□□□□ -0.93
LMO3-222ENST00000540445 FAM46CQ5VWP2 391 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms