RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SOX11P35716 441 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 GRIA3P42263 894 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 NR1D2Q14995 579 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 NADK2Q4G0N4 442 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 DPP9Q86TI2 863 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 TMEM126BQ8IUX1 230 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 OR52K1Q8NGK4 314 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 COX4I2Q96KJ9 171 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 CPXM1Q96SM3 734 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 AKAP11Q9UKA4 1901 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 SIPA1L3O60292 1781 aaPredicted RBP13.24□□□□□ -0.29
DNMT1-203ENST00000540357 ATRNL1Q5VV63 1379 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 INPP4BO15327 924 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 ITGAXP20702 1163 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 CLK1P49759 484 aaKnown RBP13.24□□□□□ -0.29
DNMT1-203ENST00000540357 TAF6P49848 677 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 CLCN2P51788 898 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 BACE1P56817 501 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 DLG1Q12959 904 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 MSS51Q4VC12 460 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 ZNF484Q5JVG2 852 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 C6orf10Q5SRN2 563 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 METTL7BQ6UX53 244 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 ERI1Q8IV48 349 aaKnown RBP13.24□□□□□ -0.29
DNMT1-203ENST00000540357 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.24□□□□□ -0.29
DNMT1-203ENST00000540357 GLMNQ92990 594 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 MARK4Q96L34 752 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 PRKD2Q9BZL6 878 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 WDCPQ9H6R7 721 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 CYLDQ9NQC7 956 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 TCRBV7S3A2A0A539 114 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 IQCA1LA6NCM1 817 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 ARHGEF9O43307 516 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 JCHAINP01591 159 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 ATP5F1P24539 256 aaPredicted RBP13.24□□□□□ -0.29
DNMT1-203ENST00000540357 CHRNA5P30532 468 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 NME5P56597 212 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 ITGADQ13349 1161 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 VWA5B1Q5TIE3 1220 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 ULK4Q96C45 1275 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 CCDC106Q9BWC9 280 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 POLR1BQ9H9Y6 1135 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 MYH3P11055 1940 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 SOAT2O75908 522 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 MAP3K10Q02779 954 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 CAPSQ13938 189 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 KCNJ11Q14654 390 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 PCSK7Q16549 785 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 SFT2D3Q587I9 215 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 ZBTB41Q5SVQ8 909 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 FKBP1CQ5VVH2 108 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 DDIT4Q9NX09 232 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 FARP1Q9Y4F1 1045 aaPredicted RBP13.24□□□□□ -0.29
DNMT1-203ENST00000540357 TEX264Q9Y6I9 313 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 CNTNAP2Q9UHC6 1331 aa13.24□□□□□ -0.29
DNMT1-203ENST00000540357 FAM95CA0A1B0GW59 222 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 VNN1O95497 513 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 CSH1P0DML2 217 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 CSH2P0DML3 217 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 CCNA2P20248 432 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 CBX3Q13185 183 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 TIGD7Q6NT04 549 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-203ENST00000540357 FAM47BQ8NA70 645 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 QTRT2Q9H974 415 aaKnown RBP13.23□□□□□ -0.29
DNMT1-203ENST00000540357 PREBQ9HCU5 417 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 TGFB3P10600 412 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 CLCN3P51790 818 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 LSAMPQ13449 338 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 FAM98BQ52LJ0 330 aaKnown RBP13.23□□□□□ -0.29
DNMT1-203ENST00000540357 BROXQ5VW32 411 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 FICDQ9BVA6 458 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 PMPCBO75439 489 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 TPH1P17752 444 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 CDH3P22223 829 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 HPCAP84074 193 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 ZCCHC7Q8N3Z6 543 aaKnown RBP13.23□□□□□ -0.29
DNMT1-203ENST00000540357 DCPSQ96C86 337 aaKnown RBP13.23□□□□□ -0.29
DNMT1-203ENST00000540357 GJD4Q96KN9 370 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-203ENST00000540357 QKIQ96PU8 341 aaKnown RBP eCLIP13.23□□□□□ -0.29
DNMT1-203ENST00000540357 ANAPC2Q9UJX6 822 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 PLCH1Q4KWH8 1693 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 ROBO1Q9Y6N7 1651 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 IMPDH2P12268 514 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 TSPY1Q01534 308 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 EPS8Q12929 822 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 TMEM63BQ5T3F8 832 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 CMC1Q7Z7K0 106 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 ZNF516Q92618 1163 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 GATA6Q92908 595 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 NSMCE2Q96MF7 247 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 MRPL57Q9BQC6 102 aaKnown RBP13.23□□□□□ -0.29
DNMT1-203ENST00000540357 WDR55Q9H6Y2 383 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-203ENST00000540357 COMMD8Q9NX08 183 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 SIRPGQ9P1W8 387 aa13.23□□□□□ -0.29
DNMT1-203ENST00000540357 FNDC3AQ9Y2H6 1198 aaKnown RBP13.23□□□□□ -0.29
DNMT1-203ENST00000540357 E7ESA3 106 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 DLGAP3O95886 979 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 MOCS2O96007 188 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-203ENST00000540357 TCF4P15884 667 aa13.22□□□□□ -0.29
DNMT1-203ENST00000540357 ZNF12P17014 697 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms