RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 MAN1C1Q9NR34 630 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 EIF2B3Q9NR50 452 aaKnown RBP11.77□□□□□ -0.52
C11orf54-214ENST00000540113 NMRK1Q9NWW6 199 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 CPSF2Q9P2I0 782 aaKnown RBP11.77□□□□□ -0.52
C11orf54-214ENST00000540113 IGSF9Q9P2J2 1179 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 TAGLN3Q9UI15 199 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 NUDT5Q9UKK9 219 aa11.77□□□□□ -0.52
C11orf54-214ENST00000540113 F8W810 466 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 SPECC1L-ADORA2AF8WAN1 911 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 ZMPSTE24O75844 475 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 POMCP01189 267 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 CD1EP15812 388 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 BDNFP23560 247 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 CNTFP26441 200 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 NMBRP28336 390 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 CCR10P46092 362 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 BRCC3P46736 316 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 TM4SF4P48230 202 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 TIGD5Q53EQ6 642 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 NAPRTQ6XQN6 538 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 KDELC2Q7Z4H8 507 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 RPAINQ86UA6 219 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.77□□□□□ -0.53
C11orf54-214ENST00000540113 TMEM86AQ8N2M4 240 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
C11orf54-214ENST00000540113 SPATA22Q8NHS9 363 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 APBB2Q92870 758 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 ATP2A3Q93084 1043 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 RNF34Q969K3 372 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 FERMT1Q9BQL6 677 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 COLEC11Q9BWP8 271 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 UNKQ9C0B0 810 aaKnown RBP11.77□□□□□ -0.53
C11orf54-214ENST00000540113 UPF3AQ9H1J1 476 aaKnown RBP11.77□□□□□ -0.53
C11orf54-214ENST00000540113 WDCPQ9H6R7 721 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 IARS2Q9NSE4 1012 aaKnown RBP11.77□□□□□ -0.53
C11orf54-214ENST00000540113 COPG2Q9UBF2 871 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 OR12D3Q9UGF7 316 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 DCDC2Q9UHG0 476 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 GABRQQ9UN88 632 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 LRRC42Q9Y546 428 aa11.77□□□□□ -0.53
C11orf54-214ENST00000540113 SF3B1O75533 1304 aaKnown RBP eCLIP11.76□□□□□ -0.53
C11orf54-214ENST00000540113 ZCWPW2A0A1B0GU75 182 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 LRIG2O94898 1065 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 AP2A1O95782 977 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 RALBP11234 206 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 AVPR1AP37288 418 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 GP5P40197 560 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 LHX1P48742 406 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 PGFP49763 221 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 MUM1Q2TAK8 710 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 ANKRD20A4Q4UJ75 823 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 RALGPS1Q5JS13 557 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 SNX30Q5VWJ9 437 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 RWDD4Q6NW29 188 aaKnown RBP11.76□□□□□ -0.53
C11orf54-214ENST00000540113 CYS1Q717R9 158 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 TMPRSS6Q8IU80 811 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 WDR75Q8IWA0 830 aaKnown RBP11.76□□□□□ -0.53
C11orf54-214ENST00000540113 MAB21L3Q8N8X9 362 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 SCAMP5Q8TAC9 235 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 PANX3Q96QZ0 392 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 RBBP8Q99708 897 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 C20orf96Q9NUD7 363 aaPredicted RBP11.76□□□□□ -0.53
C11orf54-214ENST00000540113 TMLHEQ9NVH6 421 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 PLA2G4CQ9UP65 541 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 TDRD15B5MCY1 1934 aaKnown RBP11.76□□□□□ -0.53
C11orf54-214ENST00000540113 C9IYK1 514 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 DFFAO00273 331 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 KPNA6O60684 536 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 FBXO21O94952 628 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 NCF2P19878 526 aaPredicted RBP11.76□□□□□ -0.53
C11orf54-214ENST00000540113 PAX7P23759 505 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 CD52P31358 61 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 NUMBP49757 651 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 IDH3AP50213 366 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 UPP1Q16831 310 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 SPANXN3Q5MJ09 141 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 CD300LGQ6UXG3 332 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 MRPL10Q7Z7H8 261 aaKnown RBP11.76□□□□□ -0.53
C11orf54-214ENST00000540113 TAC4Q86UU9 113 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 SCUBE1Q8IWY4 988 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 MICAL1Q8TDZ2 1067 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 DNAJC9Q8WXX5 260 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 STMN2Q93045 179 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 MYLPFQ96A32 169 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 NTAN1Q96AB6 310 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 LRRC40Q9H9A6 602 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 CHST12Q9NRB3 414 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 BFARQ9NZS9 450 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 GIT1Q9Y2X7 761 aa11.76□□□□□ -0.53
C11orf54-214ENST00000540113 A0A096LPK6 155 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 LOC100653049A0A140TA62 436 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 ARHGAP42A6NI28 874 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 KIF3CO14782 793 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 KRT34O76011 436 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 USP1O94782 785 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 MT-CYBP00156 380 aaPredicted RBP11.75□□□□□ -0.53
C11orf54-214ENST00000540113 SERPINE1P05121 402 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 SERPINA6P08185 405 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 CPA3P15088 417 aa11.75□□□□□ -0.53
C11orf54-214ENST00000540113 GARSP41250 739 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms