RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ILVBLA1L0T0 632 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 TMEM110-MUSTN1A8MSY1 372 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 WASH4PA8MWX3 477 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 K7ESF4 209 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 SGK1O00141 431 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 EEF2KO00418 725 aaKnown RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 NPC1O15118 1278 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 TIMM44O43615 452 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 BUB1O43683 1085 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 BUB1BO60566 1050 aaPredicted RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 ADAM23O75077 832 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 ATG13O75143 517 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 MOCS3O95396 460 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 KLF8O95600 359 aaPredicted RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 ASLP04424 464 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 DLDP09622 509 aaKnown RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 GOT1P17174 413 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 POLR2EP19388 210 aaKnown RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 EPHB2P29323 1055 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 OR1E1P30953 314 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 GJC1P36383 396 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 IL12RB1P42701 662 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 CTSOP43234 321 aaPredicted RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 HCAR3P49019 387 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 NUMBP49757 651 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 ARSEP51690 589 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 ZNF135P52742 658 aaPredicted RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 TPI1P60174 286 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 ZNF177Q13360 481 aaPredicted RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 DPYSQ14117 519 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 ZNF234Q14588 700 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 HADHQ16836 314 aaKnown RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 BOLA3Q53S33 107 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 PPP6R3Q5H9R7 873 aaPredicted RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 RNF219Q5W0B1 726 aaPredicted RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 ZNF783Q6ZMS7 281 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 RFX8Q6ZV50 586 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 TRMT11Q7Z4G4 463 aaKnown RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 KIAA1328Q86T90 577 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 TXLNBQ8N3L3 684 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 CCDC33Q8N5R6 958 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 RTL3Q8N8U3 475 aaKnown RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 TXNDC5Q8NBS9 432 aaKnown RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 PRSS33Q8NF86 280 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 TPCN2Q8NHX9 752 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 CYB5D2Q8WUJ1 264 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 UCMAQ8WVF2 138 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 SORCS1Q8WY21 1168 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 HSPH1Q92598 858 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 ANP32BQ92688 251 aaKnown RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 MRGPRX3Q96LB0 322 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 PSMB7Q99436 277 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 GABRG3Q99928 467 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 FEM1AQ9BSK4 669 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 KRTAP4-8Q9BYQ9 185 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 MUC3BQ9H195 1237 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 GOLPH3Q9H4A6 298 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 NOL6Q9H6R4 1146 aaKnown RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 CATSPERBQ9H7T0 1116 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 PCDH18Q9HCL0 1135 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 CD248Q9HCU0 757 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 KLHL11Q9NVR0 708 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 POLR3BQ9NW08 1133 aaPredicted RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 CACNA2D2Q9NY47 1150 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 CWC15Q9P013 229 aaKnown RBP7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 TRIM10Q9UDY6 481 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 DNAI1Q9UI46 699 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 VPS28Q9UK41 221 aa7.16□□□□□ -1.26
LPCAT3-209ENST00000540060 A0A1W2PQF6 199 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 WASH3PC4AMC7 463 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 H3BRJ5 948 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 LAMTOR5O43504 91 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 PSTPIP1O43586 416 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 SPOPO43791 374 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 RAMP2O60895 175 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 ATP5BP06576 529 aaKnown RBP7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 SRPRAP08240 638 aaKnown RBP7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 KRT7P08729 469 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 CD48P09326 243 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 HOXB2P14652 356 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 COL9A1P20849 921 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 COMTP21964 271 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 PRKCHP24723 683 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 NTSR1P30989 418 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 ARL4AP40617 200 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 WASP42768 502 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 SLC1A1P43005 524 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 SSR1P43307 286 aaKnown RBP7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 NOP2P46087 812 aaKnown RBP7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 CXCL12P48061 93 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 STK19P49842 368 aaPredicted RBP7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 CDH6P55285 790 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 ECT2LQ008S8 904 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 GNA12Q03113 381 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 KIF5AQ12840 1032 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 TCF15Q12870 199 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 DPYSL3Q14195 570 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 E2F5Q15329 346 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 ANGPT1Q15389 498 aa7.15□□□□□ -1.26
LPCAT3-209ENST00000540060 CRY1Q16526 586 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms