RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	USP49	Q70CQ1	688 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	SH3BP5L	Q7L8J4	393 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	SYT12	Q8IV01	421 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	MBD2	Q9UBB5	411 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	MORF4L1	Q9UBU8	362 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	PRKAG3	Q9UGI9	489 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	PCDHGC5	Q9Y5F6	944 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	BIRC5	O15392	142 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	ERF	P50548	548 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	CSNK2B	P67870	215 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	CDK16	Q00536	496 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	INO80D	Q53TQ3	878 aa	Predicted RBP	9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	SCAI	Q8N9R8	606 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	ITFG1	Q8TB96	612 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	IL22	Q9GZX6	179 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	NRDE2	Q9H7Z3	1164 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	POLL	Q9UGP5	575 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	ANGPT4	Q9Y264	503 aa		9.15	□□□□□ -0.94
ECHDC2-222	ENST00000539680	IRGM	A1A4Y4	181 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	BCLAF3	A2AJT9	711 aa	Known RBP	9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	APOC4-APOC2	K7ER74	178 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	PRMT3	O60678	531 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	ATP9A	O75110	1047 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	MLYCD	O95822	493 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	APOC2	P02655	101 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	HIST1H2AB	P04908	130 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	ASGR1	P07306	291 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	ENO2	P09104	434 aa	Predicted RBP	9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	PSMB9	P28065	219 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	S100A3	P33764	101 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	CASP4	P49662	377 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	HNMT	P50135	292 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	CDC42	P60953	191 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	DGKK	Q5KSL6	1271 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	ZDHHC20	Q5W0Z9	365 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	LPCAT2	Q7L5N7	544 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	HIST3H2A	Q7L7L0	130 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	TMC7	Q7Z402	723 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	VN1R5	Q7Z5H4	357 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	GPSM1	Q86YR5	675 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	CAMKK1	Q8N5S9	505 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	OR52L1	Q8NGH7	329 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	RORB	Q92753	470 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	HIST1H2AC	Q93077	130 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	MTFR1L	Q9H019	292 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	ATXN3L	Q9H3M9	355 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	MRPL17	Q9NRX2	175 aa	Known RBP	9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	MRPL39	Q9NYK5	338 aa	Known RBP	9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	CRNN	Q9UBG3	495 aa	Predicted RBP	9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	POLR1D	Q9Y2S0	133 aa		9.15	□□□□□ -0.95
ECHDC2-222	ENST00000539680	MSC	O60682	206 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	SPIRE1	Q08AE8	756 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	SEC23A	Q15436	765 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	MZT2B	Q6NZ67	158 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	COMMD2	Q86X83	199 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	CROCCP3	Q8IVE0	287 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	MAP4K3	Q8IVH8	894 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	UTP15	Q8TED0	518 aa	Known RBP	9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	KAT2B	Q92831	832 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	MIEF2	Q96C03	454 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	HGH1	Q9BTY7	390 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	POLR1B	Q9H9Y6	1135 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	GSTK1	Q9Y2Q3	226 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	VWDE	Q8N2E2	1590 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	RECQL5	O94762	991 aa	Predicted RBP	9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	FTH1	P02794	183 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	LTA4H	P09960	611 aa	Known RBP	9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	HSMCR30	P0CW71	290 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	COX7A2	P14406	83 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	RPL14	P50914	215 aa	Known RBP	9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	NT5DC1	Q5TFE4	455 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	C9orf131	Q5VYM1	1079 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	PLEKHA7	Q6IQ23	1121 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	TLK2	Q86UE8	772 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	TPD52L3	Q96J77	140 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	OSMR	Q99650	979 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	ABHD16B	Q9H3Z7	469 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	PRDM8	Q9NQV8	689 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	ATP6V1H	Q9UI12	483 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	ZNF232	Q9UNY5	417 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	CLUH	O75153	1309 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	ANKDD1B	A6NHY2	528 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	LACTBL1	A8MY62	500 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	IL6	P05231	212 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	INSRR	P14616	1297 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	LBP	P18428	481 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	ME2	P23368	584 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	ELK3	P41970	407 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	CLCN5	P51795	746 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	AIF1	P55008	147 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	SNRPD1	P62314	119 aa	Known RBP	9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	PPAT	Q06203	517 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	ST3GAL1	Q11201	340 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	POU6F1	Q14863	301 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	CRY1	Q16526	586 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	PAGE2	Q7Z2X7	111 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	OR6Y1	Q8NGX8	325 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	ACER1	Q8TDN7	264 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	HEXDC	Q8WVB3	486 aa		9.14	□□□□□ -0.95
ECHDC2-222	ENST00000539680	NELL1	Q92832	810 aa		9.14	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms