RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 ZNF669Q96BR6 464 aaPredicted RBP9.87□□□□□ -0.83
CDH13-204ENST00000539548 LRGUKQ96M69 825 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 CDRT15Q96T59 188 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 SYT17Q9BSW7 474 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 MCMBPQ9BTE3 642 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 DRC3Q9H069 523 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 DPEP3Q9H4B8 488 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 CASS4Q9NQ75 786 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 BFARQ9NZS9 450 aa9.87□□□□□ -0.83
CDH13-204ENST00000539548 FZD9O00144 591 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 AP2A1O95782 977 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 PENKP01210 267 aaPredicted RBP9.86□□□□□ -0.83
CDH13-204ENST00000539548 TFAP2AP05549 437 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 PMLP29590 882 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 RGS2P41220 211 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 NPY2RP49146 381 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 CSRP3P50461 194 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 NUDT2P50583 147 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 IRF9Q00978 393 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 CYLC2Q14093 348 aaPredicted RBP9.86□□□□□ -0.83
CDH13-204ENST00000539548 TTLL4Q14679 1199 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 SMAD1Q15797 465 aaKnown RBP9.86□□□□□ -0.83
CDH13-204ENST00000539548 LSM12Q3MHD2 195 aaKnown RBP9.86□□□□□ -0.83
CDH13-204ENST00000539548 DCAF4L1Q3SXM0 396 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 RARS2Q5T160 578 aaKnown RBP9.86□□□□□ -0.83
CDH13-204ENST00000539548 ZYG11AQ6WRX3 759 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 DRAXINQ8NBI3 349 aaPredicted RBP9.86□□□□□ -0.83
CDH13-204ENST00000539548 NT5C3BQ969T7 300 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 ZMAT2Q96NC0 199 aaKnown RBP9.86□□□□□ -0.83
CDH13-204ENST00000539548 AGAP3Q96P47 875 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 AGAP2Q99490 1192 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 CXCL16Q9H2A7 254 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 ZNF385DQ9H6B1 395 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 UBAP1Q9NZ09 502 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 ATXN10Q9UBB4 475 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 VTI1BQ9UEU0 232 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 RIMS3Q9UJD0 308 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 VANGL2Q9ULK5 521 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 ANKRD6Q9Y2G4 727 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 RAD54BQ9Y620 910 aa9.86□□□□□ -0.83
CDH13-204ENST00000539548 COL1A2P08123 1366 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 GOLGB1Q14789 3259 aaKnown RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 GOLGA8QA0A0J9YX86 632 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 GOLGA8OA6NCC3 632 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 ERI2A8K979 691 aaKnown RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 GOLGA8NF8WBI6 632 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 SLCO1B7G3V0H7 640 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 VILLO15195 856 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 GRID2O43424 1007 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 DAB1O75553 588 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 OR6B1O95007 311 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 CRTAMO95727 393 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 CLPTM1O96005 669 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 LTFP02788 710 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 LGALS2P05162 132 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 CD1EP15812 388 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 TFEBP19484 476 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 DPYSQ14117 519 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 VGLL4Q14135 290 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 FLOT2Q14254 428 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 DLG2Q15700 870 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 CNGA3Q16281 694 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 PABPC1LQ4VXU2 614 aaKnown RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 HSP90AA5PQ58FG0 334 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 SEL1L3Q68CR1 1132 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 BNIPLQ7Z465 357 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 EGFL6Q8IUX8 553 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 PGAM4Q8N0Y7 254 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 AHI1Q8N157 1196 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 TMEM151AQ8N4L1 468 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 NETO2Q8NC67 525 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 BEST2Q8NFU1 509 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 KBTBD7Q8WVZ9 684 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 NLRP7Q8WX94 980 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 ZFRQ96KR1 1074 aaKnown RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 NPY6RQ99463 290 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 SGIP1Q9BQI5 828 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 UBE2OQ9C0C9 1292 aaKnown RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 WDR55Q9H6Y2 383 aaPredicted RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 CAB39LQ9H9S4 337 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 PDGFCQ9NRA1 345 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 CLIC5Q9NZA1 410 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 PTTG2Q9NZH5 202 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 LZTS1Q9Y250 596 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 IRF6O14896 467 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 DCLK1O15075 740 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 HCRTO43612 131 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 CREB3O43889 395 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 CABYRO75952 493 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 PGM3O95394 542 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 PDGFRBP09619 1106 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 XRCC1P18887 633 aaPredicted RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 MPSTP25325 297 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 PTPN3P26045 913 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 NOS2P35228 1153 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 GNL1P36915 607 aaPredicted RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 PPARGP37231 505 aaPredicted RBP9.85□□□□□ -0.83
CDH13-204ENST00000539548 HSPA13P48723 471 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 THOP1P52888 689 aa9.85□□□□□ -0.83
CDH13-204ENST00000539548 CREB5Q02930 508 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms