RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 NOMO3P69849 1222 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 KIAA0319LQ8IZA0 1049 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 ELOVL6Q9H5J4 265 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 TLR8Q9NR97 1041 aaKnown RBP14.79□□□□□ -0.04
CACNB1-206ENST00000539338 RRN3Q9NYV6 651 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 SEPT4O43236 478 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 TRUB2O95900 331 aaKnown RBP14.79□□□□□ -0.04
CACNB1-206ENST00000539338 NUDT17P0C025 328 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 CAPSQ13938 189 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 TRIM16LQ309B1 348 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 DHFR2Q86XF0 187 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 DDHD1Q8NEL9 900 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 GLMNQ92990 594 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 SPACA7Q96KW9 195 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 SNRNP25Q9BV90 132 aaKnown RBP14.79□□□□□ -0.04
CACNB1-206ENST00000539338 DMAP1Q9NPF5 467 aaPredicted RBP14.79□□□□□ -0.04
CACNB1-206ENST00000539338 KCNK4Q9NYG8 393 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 PLA2G4CQ9UP65 541 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 MRPS23Q9Y3D9 190 aaKnown RBP14.79□□□□□ -0.04
CACNB1-206ENST00000539338 LTFP02788 710 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 POU1F1P28069 291 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 ZNF143P52747 638 aaPredicted RBP14.79□□□□□ -0.04
CACNB1-206ENST00000539338 RTP1P59025 263 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 DEFA1P59665 94 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 DEFA3P59666 94 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 VAC14Q08AM6 782 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 MRPL28Q13084 256 aaKnown RBP14.79□□□□□ -0.04
CACNB1-206ENST00000539338 BMT2Q1RMZ1 405 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 LLGL2Q6P1M3 1020 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 FIG4Q92562 907 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 FAM120BQ96EK7 910 aaKnown RBP14.79□□□□□ -0.04
CACNB1-206ENST00000539338 RERGLQ9H628 205 aa14.79□□□□□ -0.04
CACNB1-206ENST00000539338 FGRP09769 529 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 FASP25445 335 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 CHI3L1P36222 383 aaPredicted RBP14.78□□□□□ -0.04
CACNB1-206ENST00000539338 SKIV2L2P42285 1042 aaKnown RBP14.78□□□□□ -0.04
CACNB1-206ENST00000539338 LRRC38Q5VT99 294 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 ZNF410Q86VK4 478 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 TRIM48Q8IWZ4 208 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 PRKD2Q9BZL6 878 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 CAPN10Q9HC96 672 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 ERVK-5Q9HDB9 667 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 GMEB2Q9UKD1 530 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 CRYL1Q9Y2S2 319 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 NDUFAF1Q9Y375 327 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 GNG14A0A1W2PPG7 69 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 PPP1R11O60927 126 aaPredicted RBP14.78□□□□□ -0.04
CACNB1-206ENST00000539338 PSMG1O95456 288 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 ME2P23368 584 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 MAPK1P28482 360 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 TMED10P49755 219 aaKnown RBP14.78□□□□□ -0.04
CACNB1-206ENST00000539338 DRG2P55039 364 aaKnown RBP14.78□□□□□ -0.04
CACNB1-206ENST00000539338 ITGA7Q13683 1181 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 PARP6Q2NL67 630 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 LRRC39Q96DD0 335 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 NRDE2Q9H7Z3 1164 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 SLCO1B3Q9NPD5 702 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 ZC4H2Q9NQZ6 224 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 PAPOLBQ9NRJ5 636 aaKnown RBP14.78□□□□□ -0.04
CACNB1-206ENST00000539338 NR2E1Q9Y466 385 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 UNC5CO95185 931 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 NAIF1Q69YI7 327 aaPredicted RBP14.78□□□□□ -0.04
CACNB1-206ENST00000539338 C12orf50Q8NA57 414 aaPredicted RBP14.78□□□□□ -0.04
CACNB1-206ENST00000539338 FNDC5Q8NAU1 212 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 GIMAP4Q9NUV9 329 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 NCDNQ9UBB6 729 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 CCDC159P0C7I6 412 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 CCDC142Q17RM4 750 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 ZC3H12AQ5D1E8 599 aaKnown RBP14.78□□□□□ -0.04
CACNB1-206ENST00000539338 YTHDF3Q7Z739 585 aaKnown RBP14.78□□□□□ -0.04
CACNB1-206ENST00000539338 DSG4Q86SJ6 1040 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 SEMA6AQ9H2E6 1030 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 SMPD4Q9NXE4 827 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 USE1Q9NZ43 259 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 ANKRD6Q9Y2G4 727 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 PCDHB5Q9Y5E4 795 aa14.78□□□□□ -0.04
CACNB1-206ENST00000539338 hCG_1818297A0A087WSY0 165 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 A0A0A0MRY4 1105 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 RGS5O15539 181 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 PCNAP12004 261 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 MLNP12872 115 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 CDK7P50613 346 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 ZACNQ401N2 412 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 ACBD5Q5T8D3 534 aaPredicted RBP14.77□□□□□ -0.04
CACNB1-206ENST00000539338 PTF1AQ7RTS3 328 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 PHF13Q86YI8 300 aaPredicted RBP14.77□□□□□ -0.04
CACNB1-206ENST00000539338 MARK4Q96L34 752 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 SPATA13Q96N96 652 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 PCDHB18PQ96TA0 734 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 SMAD5Q99717 465 aaKnown RBP14.77□□□□□ -0.04
CACNB1-206ENST00000539338 COPS7BQ9H9Q2 264 aaPredicted RBP14.77□□□□□ -0.04
CACNB1-206ENST00000539338 ATP13A1Q9HD20 1204 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 PAIP2BQ9ULR5 123 aaKnown RBP14.77□□□□□ -0.04
CACNB1-206ENST00000539338 NFASCO94856 1347 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 MGAT4DA6NG13 374 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 FSCN2O14926 492 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 LZTS3O60299 673 aaPredicted RBP14.77□□□□□ -0.04
CACNB1-206ENST00000539338 SLC25A3Q00325 362 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 PRKCZQ05513 592 aa14.77□□□□□ -0.04
CACNB1-206ENST00000539338 EML3Q32P44 896 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms